56 items (Cercocebus atys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OLFM4	Olfactomedin 4. (506 aa)
	GSTM3	Glutathione S-transferase. (225 aa)
	LOC105583512	J domain-containing protein. (232 aa)
	PHLPP2	PH domain and leucine rich repeat protein phosphatase 2. (1363 aa)
	TMEM9	Transmembrane protein 9. (183 aa)
	CYTH4	Cytohesin 4. (394 aa)
	DUSP11	Dual specificity phosphatase 11. (378 aa)
	TUBB6	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	CENPE	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2701 aa)
	NUPR1	Nuclear protein 1, transcriptional regulator. (82 aa)
	KIF20B	Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1823 aa)
	TUBB1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	PKNOX2	PBX/knotted 1 homeobox 2. (472 aa)
	KRR1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
	NUDCD2	NudC domain containing 2. (155 aa)
	TRIM45	Tripartite motif containing 45. (580 aa)
	ENSCATP00000005174	Uncharacterized protein. (224 aa)
	LOC105583518	J domain-containing protein. (246 aa)
	RBM44	RNA binding motif protein 44. (1055 aa)
	NINL	Ninein like. (1378 aa)
	PARP3	Poly [ADP-ribose] polymerase. (539 aa)
	ESRRA	Estrogen related receptor alpha. (422 aa)
	RAB35	RAB35, member RAS oncogene family. (201 aa)
	PPP1R13L	Protein phosphatase 1 regulatory subunit 13 like. (828 aa)
	AGBL5	ATP/GTP binding protein like 5. (886 aa)
	KIF20A	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (890 aa)
	RBM18	RNA binding motif protein 18. (190 aa)
	WAPL	WAPL cohesin release factor. (1189 aa)
	EPB41	Erythrocyte membrane protein band 4.1. (865 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	ENSCATP00000044566	Protein kinase domain-containing protein. (546 aa)
	CD34	CD34 molecule. (385 aa)
	SRA1	Steroid receptor RNA activator 1. (235 aa)
	GSTM2	Glutathione S-transferase. (222 aa)
	SETX	Senataxin. (2653 aa)
	MTUS2	Microtubule associated scaffold protein 2. (1383 aa)
	MICAL3	Microtubule associated monooxygenase, calponin and LIM domain containing 3. (2001 aa)
	NISCH	Nischarin. (1501 aa)
	CDC6	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (599 aa)
	CHRNA2	Cholinergic receptor nicotinic alpha 2 subunit. (529 aa)
	KCNV1	Potassium voltage-gated channel modifier subfamily V member 1; Belongs to the potassium channel family. (502 aa)
	USB1	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA 3' end-terminated with a 2',3'-cyclic phosphate; Belongs to the 2H phosphoesterase superfamily. USB1 family. (265 aa)
	CDC7	Protein kinase domain-containing protein. (574 aa)
	PCIF1	PDX1 C-terminal inhibiting factor 1. (704 aa)
	RFXANK	Regulatory factor X associated ankyrin containing protein. (260 aa)
	ENSCATP00000018286	J domain-containing protein. (246 aa)
	MICAL1	Microtubule associated monooxygenase, calponin and LIM domain containing 1. (1080 aa)
	LOC105594884	J domain-containing protein. (238 aa)
	FAN1	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1016 aa)
	KCTD1	BTB domain-containing protein. (865 aa)
	TEX14	Testis expressed 14, intercellular bridge forming factor. (1497 aa)
	ENSCATP00000021568	J domain-containing protein. (255 aa)
	HNF4G	Hepatocyte nuclear factor 4 gamma. (455 aa)
	SNRNP25	Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
	ACOT12	Acyl-CoA thioesterase 12. (555 aa)
	EHD2	EH domain containing 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (538 aa)

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC6	CDC7	ENSCATP00000013481	ENSCATP00000016611	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	Protein kinase domain-containing protein.	0.801
CDC6	ENSCATP00000044566	ENSCATP00000013481	ENSCATP00000044566	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	Protein kinase domain-containing protein.	0.798
CDC6	KIF20A	ENSCATP00000013481	ENSCATP00000023646	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
CDC7	CDC6	ENSCATP00000016611	ENSCATP00000013481	Protein kinase domain-containing protein.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.801
CENPE	KIF20A	ENSCATP00000030568	ENSCATP00000023646	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.921
CENPE	KIF20B	ENSCATP00000030568	ENSCATP00000025819	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.922
CENPE	MTUS2	ENSCATP00000030568	ENSCATP00000038267	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Microtubule associated scaffold protein 2.	0.735
EHD2	RAB35	ENSCATP00000003453	ENSCATP00000028334	EH domain containing 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	RAB35, member RAS oncogene family.	0.516
ENSCATP00000005174	GSTM3	ENSCATP00000005174	ENSCATP00000036689	Uncharacterized protein.	Glutathione S-transferase.	0.879
ENSCATP00000044566	CDC6	ENSCATP00000044566	ENSCATP00000013481	Protein kinase domain-containing protein.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.798
GSTM2	GSTM3	ENSCATP00000041270	ENSCATP00000036689	Glutathione S-transferase.	Glutathione S-transferase.	0.798
GSTM3	ENSCATP00000005174	ENSCATP00000036689	ENSCATP00000005174	Glutathione S-transferase.	Uncharacterized protein.	0.879
GSTM3	GSTM2	ENSCATP00000036689	ENSCATP00000041270	Glutathione S-transferase.	Glutathione S-transferase.	0.798
KIF20A	CDC6	ENSCATP00000023646	ENSCATP00000013481	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.424
KIF20A	CENPE	ENSCATP00000023646	ENSCATP00000030568	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.921
KIF20A	KIF20B	ENSCATP00000023646	ENSCATP00000025819	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.444
KIF20B	CENPE	ENSCATP00000025819	ENSCATP00000030568	Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.922
KIF20B	KIF20A	ENSCATP00000025819	ENSCATP00000023646	Kinesin family member 20B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.444
MICAL3	NINL	ENSCATP00000011927	ENSCATP00000008377	Microtubule associated monooxygenase, calponin and LIM domain containing 3.	Ninein like.	0.424
MTUS2	CENPE	ENSCATP00000038267	ENSCATP00000030568	Microtubule associated scaffold protein 2.	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.735