34 items (Cercocebus atys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NUDCD3	NudC domain containing 3. (364 aa)
	NUDCD2	NudC domain containing 2. (155 aa)
	ITGB1BP2	Integrin subunit beta 1 binding protein 2. (348 aa)
	ENSCATP00000031956	Uncharacterized protein. (161 aa)
	LOC105575979	CS domain-containing protein. (326 aa)
	LOC105597092	Uncharacterized protein. (331 aa)
	ENSCATP00000034881	CHORD domain-containing protein. (274 aa)
	ENSCATP00000035745	CHORD domain-containing protein. (129 aa)
	ODF1	Outer dense fiber of sperm tails 1. (253 aa)
	USP19	Ubiquitin specific peptidase 19. (1421 aa)
	SHQ1	SHQ1, H/ACA ribonucleoprotein assembly factor. (577 aa)
	HSPB7	Heat shock protein family B (small) member 7; Belongs to the small heat shock protein (HSP20) family. (253 aa)
	LOC105583807	Uncharacterized protein. (228 aa)
	HSPB2	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (182 aa)
	PTGES3L	Uncharacterized protein. (585 aa)
	ENSCATP00000016773	Uncharacterized protein. (304 aa)
	LOC105578963	CS domain-containing protein. (124 aa)
	LOC105579729	Nuclear distribution C, dynein complex regulator. (287 aa)
	ENSCATP00000011189	CS domain-containing protein. (168 aa)
	ENSCATP00000043788	CS domain-containing protein. (127 aa)
	CRYAA	SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. (172 aa)
	HACD3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...] (400 aa)
	ENSCATP00000003663	Uncharacterized protein. (228 aa)
	NUDCD1	NudC domain containing 1. (583 aa)
	ENSCATP00000004279	Uncharacterized protein. (114 aa)
	HSPB3	Heat shock protein family B (small) member 3; Belongs to the small heat shock protein (HSP20) family. (150 aa)
	CYB5R4	Cytochrome b5 reductase 4. (551 aa)
	CRYAB	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. (175 aa)
	HSPB1	Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family. (205 aa)
	DNAAF4	Dynein axonemal assembly factor 4. (472 aa)
	SUGT1	SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (363 aa)
	CACYBP	Uncharacterized protein. (261 aa)
	HSPB8	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family. (196 aa)
	HSPB6	Heat shock protein family B (small) member 6; Belongs to the small heat shock protein (HSP20) family. (160 aa)

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRYAA	CRYAB	ENSCATP00000043347	ENSCATP00000019000	SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	0.985
CRYAA	HSPB1	ENSCATP00000043347	ENSCATP00000019812	SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family.	0.801
CRYAA	HSPB6	ENSCATP00000043347	ENSCATP00000027335	SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Heat shock protein family B (small) member 6; Belongs to the small heat shock protein (HSP20) family.	0.801
CRYAB	CRYAA	ENSCATP00000019000	ENSCATP00000043347	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	0.985
CRYAB	HSPB1	ENSCATP00000019000	ENSCATP00000019812	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family.	0.960
CRYAB	HSPB2	ENSCATP00000019000	ENSCATP00000015524	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.824
CRYAB	HSPB6	ENSCATP00000019000	ENSCATP00000027335	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Heat shock protein family B (small) member 6; Belongs to the small heat shock protein (HSP20) family.	0.883
CRYAB	HSPB8	ENSCATP00000019000	ENSCATP00000026667	Crystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family.	0.577
ENSCATP00000003663	ENSCATP00000016773	ENSCATP00000003663	ENSCATP00000016773	Uncharacterized protein.	Uncharacterized protein.	0.603
ENSCATP00000003663	ENSCATP00000034881	ENSCATP00000003663	ENSCATP00000034881	Uncharacterized protein.	CHORD domain-containing protein.	0.440
ENSCATP00000003663	LOC105578963	ENSCATP00000003663	ENSCATP00000000851	Uncharacterized protein.	CS domain-containing protein.	0.440
ENSCATP00000003663	LOC105597092	ENSCATP00000003663	ENSCATP00000033918	Uncharacterized protein.	Uncharacterized protein.	0.440
ENSCATP00000003663	SUGT1	ENSCATP00000003663	ENSCATP00000039771	Uncharacterized protein.	SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.	0.603
ENSCATP00000016773	ENSCATP00000003663	ENSCATP00000016773	ENSCATP00000003663	Uncharacterized protein.	Uncharacterized protein.	0.603
ENSCATP00000016773	ENSCATP00000034881	ENSCATP00000016773	ENSCATP00000034881	Uncharacterized protein.	CHORD domain-containing protein.	0.620
ENSCATP00000016773	ENSCATP00000035745	ENSCATP00000016773	ENSCATP00000035745	Uncharacterized protein.	CHORD domain-containing protein.	0.618
ENSCATP00000016773	ITGB1BP2	ENSCATP00000016773	ENSCATP00000039192	Uncharacterized protein.	Integrin subunit beta 1 binding protein 2.	0.618
ENSCATP00000016773	LOC105578963	ENSCATP00000016773	ENSCATP00000000851	Uncharacterized protein.	CS domain-containing protein.	0.620
ENSCATP00000016773	LOC105597092	ENSCATP00000016773	ENSCATP00000033918	Uncharacterized protein.	Uncharacterized protein.	0.620
ENSCATP00000034881	ENSCATP00000003663	ENSCATP00000034881	ENSCATP00000003663	CHORD domain-containing protein.	Uncharacterized protein.	0.440