STRINGSTRING
TERF1 TERF1 ENSCATP00000020493 ENSCATP00000020493 DNA2 DNA2 RCBTB2 RCBTB2 DKC1 DKC1 TRUB1 TRUB1 ENSCATP00000015553 ENSCATP00000015553 ANKRD28 ANKRD28 CHTF8 CHTF8 PRIM1 PRIM1 PPP6C PPP6C H2BC15 H2BC15 PCNA PCNA RECQL4 RECQL4 LOC105572652 LOC105572652 LOC105572669 LOC105572669 H2AC6 H2AC6 RFC3 RFC3 LOC105572651 LOC105572651 H2BC3 H2BC3 LOC105572676 LOC105572676 RFC5 RFC5 H2BC8 H2BC8 MEIOB MEIOB LOC105572671 LOC105572671 H2AJ H2AJ RTEL1 RTEL1 LOC105572092 LOC105572092 RPA3 RPA3 POLR2H POLR2H CHTF18 CHTF18 TINF2 TINF2 TEN1 TEN1 NHP2 NHP2 POLD3 POLD3 H2BU1 H2BU1 STN1 STN1 CDK2 CDK2 LIG1 LIG1 RCBTB1 RCBTB1 POLR2L POLR2L SHQ1 SHQ1 POLR2F POLR2F ENSCATP00000036401 ENSCATP00000036401 CDK3 CDK3 POLR2C POLR2C POLD2 POLD2 BLM BLM WRN WRN ANKRD66 ANKRD66 H2AZ2 H2AZ2 H2BC1 H2BC1 LOC105572638 LOC105572638 LOC105572658 LOC105572658 LOC105572655 LOC105572655 FEN1 FEN1 POLR2K POLR2K POLA1 POLA1 CCNA1 CCNA1 TERF2 TERF2 TERF2IP TERF2IP H3F3B H3F3B ENSCATP00000029485 ENSCATP00000029485 ENSCATP00000029353 ENSCATP00000029353 WRAP53 WRAP53 RUVBL2 RUVBL2 POLR2B POLR2B PPP6R3 PPP6R3 DAXX DAXX POLR2D POLR2D TERT TERT ENSCATP00000026110 ENSCATP00000026110 EXD2 EXD2 RUVBL1 RUVBL1 PIF1 PIF1 POLR2G POLR2G ENSCATP00000021744 ENSCATP00000021744 ENSCATP00000022164 ENSCATP00000022164 ENSCATP00000023311 ENSCATP00000023311 POLD4 POLD4 LOC105593170 LOC105593170 POLR2E POLR2E H2BC5 H2BC5 ANKRD44 ANKRD44 LOC105572666 LOC105572666 H2BW1 H2BW1 ENSCATP00000025399 ENSCATP00000025399 H3F3A H3F3A ENSCATP00000025894 ENSCATP00000025894 RFC2 RFC2 PPP6R2 PPP6R2 RFC4 RFC4 POLD1 POLD1 CTC1 CTC1 POT1 POT1 ENSCATP00000010958 ENSCATP00000010958 CCNA2 CCNA2 DSCC1 DSCC1 ENSCATP00000010284 ENSCATP00000010284 LOC105585120 LOC105585120 LOC105593194 LOC105593194 H3-4 H3-4 POLR2A POLR2A LOC105572665 LOC105572665 RFC1 RFC1 NOP10 NOP10 H2BC7 H2BC7 LOC105597697 LOC105597697 LOC105593174 LOC105593174 H2AC4 H2AC4 H2AC20 H2AC20 H4C11 H4C11 POLR2I POLR2I POLA2 POLA2 LOC105593167 LOC105593167 H2AX H2AX H2BC11 H2BC11 H2BC21 H2BC21 LOC105593172 LOC105593172 GAR1 GAR1 LOC105593181 LOC105593181
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (437 aa)
ENSCATP00000020493Uncharacterized protein. (150 aa)
DNA2DNA replication helicase/nuclease 2. (1056 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (556 aa)
DKC1Dyskerin pseudouridine synthase 1. (514 aa)
TRUB1TruB pseudouridine synthase family member 1. (350 aa)
ENSCATP00000015553Histone H2B; Belongs to the histone H2B family. (129 aa)
ANKRD28Ankyrin repeat domain 28. (1059 aa)
CHTF8Chromosome transmission fidelity factor 8. (121 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (420 aa)
PPP6CSerine/threonine-protein phosphatase. (338 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (166 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
RECQL4RecQ like helicase 4. (1208 aa)
LOC105572652Histone H4. (103 aa)
LOC105572669Histone H2A; Belongs to the histone H2A family. (130 aa)
H2AC6Histone H2A; Belongs to the histone H2A family. (130 aa)
RFC3Replication factor C subunit 3. (356 aa)
LOC105572651Histone H4. (103 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105572676Histone H4. (103 aa)
RFC5Replication factor C subunit 5. (343 aa)
H2BC8Histone H2B type 1. (126 aa)
MEIOBMeiosis specific with OB-fold. (471 aa)
LOC105572671Histone H4. (103 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1352 aa)
LOC105572092Histone H2A; Belongs to the histone H2A family. (182 aa)
RPA3Replication protein A3. (121 aa)
POLR2HRNA polymerase II subunit H. (169 aa)
CHTF18Chromosome transmission fidelity factor 18. (1003 aa)
TINF2TERF1 interacting nuclear factor 2. (439 aa)
TEN1Uncharacterized protein. (123 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
POLD3Uncharacterized protein. (466 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (346 aa)
LIG1DNA ligase. (918 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
SHQ1SHQ1, H/ACA ribonucleoprotein assembly factor. (577 aa)
POLR2FRNA polymerase II subunit F. (158 aa)
ENSCATP00000036401Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (262 aa)
CDK3Cyclin dependent kinase 3; Belongs to the protein kinase superfamily. (305 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
POLD2DNA polymerase delta 2, accessory subunit. (504 aa)
BLMBLM RecQ like helicase. (1416 aa)
WRNWRN RecQ like helicase. (1418 aa)
ANKRD66Ankyrin repeat domain 66. (250 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC105572638Histone domain-containing protein; Belongs to the histone H2B family. (127 aa)
LOC105572658Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105572655Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
POLA1DNA polymerase. (1469 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (465 aa)
TERF2Telomeric repeat binding factor 2. (542 aa)
TERF2IPTERF2 interacting protein. (400 aa)
H3F3BH3 histone, family 3B. (136 aa)
ENSCATP00000029485Histone H2A; Belongs to the histone H2A family. (117 aa)
ENSCATP00000029353Uncharacterized protein. (77 aa)
WRAP53WD repeat containing antisense to TP53. (549 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (465 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
PPP6R3Protein phosphatase 6 regulatory subunit 3. (879 aa)
DAXXDeath domain associated protein. (739 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1123 aa)
ENSCATP00000026110Uncharacterized protein. (222 aa)
EXD2Exonuclease 3'-5' domain containing 2. (620 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (691 aa)
POLR2GRNA polymerase II subunit G. (244 aa)
ENSCATP00000021744Uncharacterized protein. (68 aa)
ENSCATP00000022164Histone H2A; Belongs to the histone H2A family. (113 aa)
ENSCATP00000023311Histone H2A; Belongs to the histone H2A family. (92 aa)
POLD4Uncharacterized protein. (107 aa)
LOC105593170Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (101 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
ANKRD44Ankyrin repeat domain 44. (1004 aa)
LOC105572666Histone H4. (103 aa)
H2BW1H2B histone family member W, testis specific; Belongs to the histone H2B family. (175 aa)
ENSCATP00000025399Histone H2B; Belongs to the histone H2B family. (134 aa)
H3F3AH3 histone, family 3A. (136 aa)
ENSCATP00000025894Histone H2A; Belongs to the histone H2A family. (115 aa)
RFC2Replication factor C subunit 2. (352 aa)
PPP6R2Protein phosphatase 6 regulatory subunit 2. (958 aa)
RFC4Replication factor C subunit 4. (349 aa)
POLD1DNA polymerase. (1107 aa)
CTC1CST telomere replication complex component 1. (1217 aa)
POT1Protection of telomeres 1. (634 aa)
ENSCATP00000010958Histone H3; Belongs to the histone H3 family. (141 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (432 aa)
DSCC1DNA replication and sister chromatid cohesion 1. (374 aa)
ENSCATP00000010284Uncharacterized protein. (164 aa)
LOC105585120Histone H4. (103 aa)
LOC105593194Histone H4. (103 aa)
H3-4Histone cluster 3 H3. (136 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
LOC105572665Histone H4. (103 aa)
RFC1Replication factor C subunit 1. (1113 aa)
NOP10NOP10 ribonucleoprotein. (64 aa)
H2BC7Histone H2B type 1. (126 aa)
LOC105597697Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105593174Histone H4. (103 aa)
H2AC4Histone H2A type 1. (130 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
H4C11Histone H4. (103 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
LOC105593167Histone H2B; Belongs to the histone H2B family. (126 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC105593172Histone H2B; Belongs to the histone H2B family. (126 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (218 aa)
LOC105593181Histone H2B type 1-M. (126 aa)
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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