STRINGSTRING
WDR82 WDR82 MSL1 MSL1 ST13 ST13 MKRN2 MKRN2 FIP1L1 FIP1L1 ENSCATP00000038342 ENSCATP00000038342 ENSCATP00000038577 ENSCATP00000038577 PABPC4 PABPC4 CIRBP CIRBP PPP2R2B PPP2R2B ENSCATP00000039518 ENSCATP00000039518 NUDT21 NUDT21 INTS9 INTS9 TWF2 TWF2 DDX25 DDX25 DDX19A DDX19A CPSF7 CPSF7 LOC105576701 LOC105576701 PABPC5 PABPC5 HBS1L HBS1L LOC105576702 LOC105576702 DDX39B DDX39B ENSCATP00000042789 ENSCATP00000042789 NXF1 NXF1 WDR90 WDR90 ENSCATP00000022163 ENSCATP00000022163 FUS FUS TMEM223 TMEM223 PABPC1L PABPC1L C3orf67 C3orf67 RBBP6 RBBP6 CASC3 CASC3 ENSCATP00000019023 ENSCATP00000019023 SAP18 SAP18 ALYREF ALYREF TWF1 TWF1 ENSCATP00000017751 ENSCATP00000017751 UPF2 UPF2 PNN PNN SMG6 SMG6 CSTF1 CSTF1 ETF1 ETF1 RNMT RNMT TARDBP TARDBP PPP2R5C PPP2R5C PPP2R3C PPP2R3C SRRM1 SRRM1 ZC3H8 ZC3H8 PPP1CA PPP1CA PABPN1L PABPN1L CFAP20 CFAP20 ENSCATP00000013074 ENSCATP00000013074 SMG5 SMG5 ENSCATP00000012212 ENSCATP00000012212 CPSF2 CPSF2 ZGRF1 ZGRF1 EIF2A EIF2A MSI1 MSI1 NCBP2 NCBP2 RBM3 RBM3 LOC105592070 LOC105592070 ENSCATP00000011235 ENSCATP00000011235 DAZAP1 DAZAP1 UPF3A UPF3A PPP2R2C PPP2R2C POLDIP3 POLDIP3 ENSCATP00000010495 ENSCATP00000010495 PARP12 PARP12 PABPC3 PABPC3 ENSCATP00000009962 ENSCATP00000009962 COPS5 COPS5 ENSCATP00000009372 ENSCATP00000009372 PPP2R1B PPP2R1B GSPT1 GSPT1 WDR33 WDR33 PPP1R42 PPP1R42 CSTF2 CSTF2 PAPOLA PAPOLA RBM8A RBM8A ZC3H3 ZC3H3 PPP2R5E PPP2R5E LOC105574335 LOC105574335 NXT1 NXT1 PYM1 PYM1 UPF3B UPF3B CPSF3 CPSF3 MAGOH MAGOH DCLRE1B DCLRE1B RNPS1 RNPS1 PELO PELO SMG7 SMG7 NCBP1 NCBP1 PPP2CB PPP2CB CSTF3 CSTF3 INTS11 INTS11 RBMX2 RBMX2 BOLL BOLL PIH1D3 PIH1D3 ENSCATP00000045990 ENSCATP00000045990 MAGOHB MAGOHB PPP2R5A PPP2R5A SYMPK SYMPK RNGTT RNGTT ENSCATP00000045093 ENSCATP00000045093 ENSCATP00000045045 ENSCATP00000045045 CLP1 CLP1 ACIN1 ACIN1 CPSF4L CPSF4L RNF141 RNF141 DDX39A DDX39A PPP2R5B PPP2R5B PAPOLG PAPOLG TMEM258 TMEM258 LOC105585327 LOC105585327 ENSCATP00000023989 ENSCATP00000023989 PPP4R1 PPP4R1 LOC105595617 LOC105595617 SSU72 SSU72 ENSCATP00000025290 ENSCATP00000025290 YTHDC1 YTHDC1 TMEM240 TMEM240 ZC3H6 ZC3H6 TUT1 TUT1 CZIB CZIB ENSCATP00000027386 ENSCATP00000027386 PPP2R3A PPP2R3A PPP2R2A PPP2R2A ENSCATP00000027471 ENSCATP00000027471 DCLRE1A DCLRE1A CPSF1 CPSF1 PPP1CB PPP1CB NXT2 NXT2 ENSCATP00000028467 ENSCATP00000028467 WDR77 WDR77 ENSCATP00000029944 ENSCATP00000029944 GLE1 GLE1 CPSF4 CPSF4 ENSCATP00000030726 ENSCATP00000030726 BCL2L2-PABPN1 BCL2L2-PABPN1 FNBP4 FNBP4 SMG1 SMG1 PPP2R3B PPP2R3B ZC3H4 ZC3H4 DUSP11 DUSP11 PABPC1 PABPC1 EIF4A3 EIF4A3 CPSF6 CPSF6 NXF3 NXF3 PPP2CA PPP2CA ENSCATP00000033245 ENSCATP00000033245 PPP2R5D PPP2R5D MKRN1 MKRN1 JAZF1 JAZF1 PPP2R2D PPP2R2D PPP1CC PPP1CC DDX19B DDX19B PPP2R1A PPP2R1A ENSCATP00000034763 ENSCATP00000034763 UPF1 UPF1 ENSCATP00000035073 ENSCATP00000035073 NEDD1 NEDD1 MORN1 MORN1 SERAC1 SERAC1 PCF11 PCF11 PPP4R4 PPP4R4 MSI2 MSI2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR82WD repeat domain 82. (313 aa)
MSL1MSL complex subunit 1. (612 aa)
ST13TPR_REGION domain-containing protein. (369 aa)
MKRN2Makorin ring finger protein 2. (405 aa)
FIP1L1Fip1 domain-containing protein. (615 aa)
ENSCATP00000038342RRM domain-containing protein. (310 aa)
ENSCATP00000038577TPR_REGION domain-containing protein. (358 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
CIRBPCold inducible RNA binding protein. (304 aa)
PPP2R2BSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (586 aa)
ENSCATP00000039518RRM domain-containing protein. (344 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
INTS9Integrator complex subunit 9. (617 aa)
TWF2Twinfilin actin binding protein 2. (336 aa)
DDX25DEAD-box helicase 25. (483 aa)
DDX19ADEAD-box helicase 19A. (450 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (511 aa)
LOC105576701Uncharacterized protein. (200 aa)
PABPC5Poly(A) binding protein cytoplasmic 5. (382 aa)
HBS1LHBS1 like translational GTPase. (698 aa)
LOC105576702Polyadenylate-binding protein 1-like 2. (200 aa)
DDX39BDExD-box helicase 39B. (425 aa)
ENSCATP00000042789TPR_REGION domain-containing protein. (233 aa)
NXF1Nuclear RNA export factor 1. (619 aa)
WDR90WD repeat domain 90. (1788 aa)
ENSCATP00000022163Uncharacterized protein. (182 aa)
FUSFUS RNA binding protein. (533 aa)
TMEM223Transmembrane protein 223. (202 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (614 aa)
C3orf67Chromosome 3 open reading frame 67. (690 aa)
RBBP6RB binding protein 6, ubiquitin ligase. (1792 aa)
CASC3CASC3 exon junction complex subunit. (706 aa)
ENSCATP00000019023RRM domain-containing protein. (280 aa)
SAP18Uncharacterized protein. (172 aa)
ALYREFAly/REF export factor. (290 aa)
TWF1Twinfilin actin binding protein 1. (391 aa)
ENSCATP00000017751Uncharacterized protein. (139 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1272 aa)
PNNPinin, desmosome associated protein. (717 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1419 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
ETF1eRF1_1 domain-containing protein. (423 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (476 aa)
TARDBPTAR DNA binding protein. (406 aa)
PPP2R5CSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (579 aa)
PPP2R3CProtein phosphatase 2 regulatory subunit B''gamma. (453 aa)
SRRM1Serine and arginine repetitive matrix 1. (917 aa)
ZC3H8Zinc finger CCCH-type containing 8. (298 aa)
PPP1CASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (275 aa)
CFAP20Cilia and flagella associated protein 20. (193 aa)
ENSCATP00000013074RRM domain-containing protein. (300 aa)
SMG5SMG5 nonsense mediated mRNA decay factor. (1016 aa)
ENSCATP00000012212eRF1_1 domain-containing protein. (408 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
ZGRF1Zinc finger GRF-type containing 1. (2075 aa)
EIF2AEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (589 aa)
MSI1Musashi RNA binding protein 1. (362 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
RBM3RRM domain-containing protein. (157 aa)
LOC105592070Uncharacterized protein. (345 aa)
ENSCATP00000011235HipN domain-containing protein. (158 aa)
DAZAP1DAZ associated protein 1. (408 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (463 aa)
PPP2R2CSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (447 aa)
POLDIP3DNA polymerase delta interacting protein 3. (421 aa)
ENSCATP00000010495Uncharacterized protein. (315 aa)
PARP12Poly(ADP-ribose) polymerase family member 12. (701 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (630 aa)
ENSCATP00000009962RRM domain-containing protein. (366 aa)
COPS5COP9 signalosome subunit 5. (334 aa)
ENSCATP00000009372STI1 domain-containing protein. (344 aa)
PPP2R1BProtein phosphatase 2 scaffold subunit Abeta. (667 aa)
GSPT1G1 to S phase transition 1. (614 aa)
WDR33WD repeat domain 33. (1336 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42. (357 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
ZC3H3Zinc finger CCCH-type containing 3. (950 aa)
PPP2R5ESerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (468 aa)
LOC105574335NTF2 domain-containing protein. (238 aa)
NXT1Nuclear transport factor 2 like export factor 1. (140 aa)
PYM1PYM homolog 1, exon junction complex associated factor. (216 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (676 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
DCLRE1BDNA cross-link repair 1B. (532 aa)
RNPS1RRM domain-containing protein. (305 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
SMG7SMG7 nonsense mediated mRNA decay factor. (1170 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
PPP2CBSerine/threonine-protein phosphatase. (309 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
INTS11Integrator complex subunit 11. (609 aa)
RBMX2RNA binding motif protein X-linked 2. (322 aa)
BOLLBoule homolog, RNA binding protein. (320 aa)
PIH1D3PIH1 domain containing 3. (209 aa)
ENSCATP00000045990Uncharacterized protein. (565 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
PPP2R5ASerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (486 aa)
SYMPKSymplekin. (1312 aa)
RNGTTPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (597 aa)
ENSCATP00000045093Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (572 aa)
ENSCATP00000045045TDP43_N domain-containing protein. (250 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (436 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1340 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
RNF141Ring finger protein 141. (230 aa)
DDX39ADExD-box helicase 39A. (435 aa)
PPP2R5BSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (497 aa)
PAPOLGPoly(A) polymerase gamma. (665 aa)
TMEM258Transmembrane protein 258. (79 aa)
LOC105585327WRNPLPNID domain-containing protein. (954 aa)
ENSCATP00000023989TPR_REGION domain-containing protein. (215 aa)
PPP4R1Protein phosphatase 4 regulatory subunit 1. (907 aa)
LOC105595617Uncharacterized protein. (491 aa)
SSU72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
ENSCATP00000025290Uncharacterized protein. (539 aa)
YTHDC1YTH domain containing 1. (736 aa)
TMEM240Transmembrane protein 240. (173 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1188 aa)
TUT1RRM domain-containing protein. (908 aa)
CZIBCXXC motif containing zinc binding protein. (160 aa)
ENSCATP00000027386Uncharacterized protein. (109 aa)
PPP2R3AProtein phosphatase 2 regulatory subunit B''alpha. (1150 aa)
PPP2R2ASerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (457 aa)
ENSCATP00000027471Uncharacterized protein. (54 aa)
DCLRE1ADNA cross-link repair 1A. (1040 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
NXT2Nuclear transport factor 2 like export factor 2. (197 aa)
ENSCATP00000028467PWI domain-containing protein. (755 aa)
WDR77WD repeat domain 77. (342 aa)
ENSCATP00000029944Uncharacterized protein. (139 aa)
GLE1GLE1 RNA export mediator. (698 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
ENSCATP00000030726RRM domain-containing protein. (157 aa)
BCL2L2-PABPN1BCL2L2-PABPN1 readthrough. (333 aa)
FNBP4Formin binding protein 4. (1017 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3660 aa)
PPP2R3BEF-hand domain-containing protein. (176 aa)
ZC3H4Zinc finger CCCH-type containing 4. (1303 aa)
DUSP11Dual specificity phosphatase 11. (378 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
EIF4A3Uncharacterized protein; Belongs to the DEAD box helicase family. (411 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
NXF3Nuclear RNA export factor 3. (544 aa)
PPP2CASerine/threonine-protein phosphatase. (309 aa)
ENSCATP00000033245Uncharacterized protein; Belongs to the DEAD box helicase family. (393 aa)
PPP2R5DSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (605 aa)
MKRN1Makorin ring finger protein 1. (482 aa)
JAZF1JAZF zinc finger 1. (243 aa)
PPP2R2DSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (453 aa)
PPP1CCSerine/threonine-protein phosphatase. (293 aa)
DDX19BDEAD-box helicase 19B. (420 aa)
PPP2R1AProtein phosphatase 2 scaffold subunit Aalpha. (589 aa)
ENSCATP00000034763Uncharacterized protein. (324 aa)
UPF1UPF1 RNA helicase and ATPase. (1073 aa)
ENSCATP00000035073Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (451 aa)
NEDD1NEDD1 gamma-tubulin ring complex targeting factor. (661 aa)
MORN1MORN repeat containing 1. (496 aa)
SERAC1Serine active site containing 1. (624 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
PPP4R4Protein phosphatase 4 regulatory subunit 4. (872 aa)
MSI2Musashi RNA binding protein 2. (328 aa)
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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