(24 nodes) Mixed, incl. Pseudouridine synthase, catalytic domain superfamily, and SpoU rRNA Methylase family network (Macaca fascicularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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Your Input:
	GTPBP8	GTP binding protein 8 (putative). (284 aa)
	PUS3	Pseudouridine synthase 3. (480 aa)
	NSUN4	NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (384 aa)
	MTG1	Mitochondrial ribosome associated GTPase 1. (356 aa)
	TRIT1	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (467 aa)
	GTPBP3	GTP binding protein 3, mitochondrial. (514 aa)
	MTERF4	Mitochondrial transcription termination factor 4. (368 aa)
	MRM1	Mitochondrial rRNA methyltransferase 1. (349 aa)
	RPUSD3	RNA pseudouridine synthase D3. (351 aa)
	MTG2	Mitochondrial ribosome associated GTPase 2. (406 aa)
	MALSU1	Mitochondrial assembly of ribosomal large subunit 1. (235 aa)
	METTL15	Uncharacterized protein. (407 aa)
	RPUSD2	RNA pseudouridine synthase domain containing 2. (545 aa)
	MRM3	Mitochondrial rRNA methyltransferase 3. (420 aa)
	PUS7L	Pseudouridine synthase 7 like. (654 aa)
	MTO1	Protein MTO1 homolog, mitochondrial; Involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U34) of the wobble uridine base in mitochondrial tRNAs. (686 aa)
	RPUSD1	RNA pseudouridine synthase domain containing 1. (312 aa)
	ERGIC1	Endoplasmic reticulum-golgi intermediate compartment 1. (357 aa)
	PUS7	Pseudouridine synthase 7. (712 aa)
	MRM2	FtsJ domain-containing protein. (246 aa)
	GTPBP6	GTP binding protein 6 (putative). (516 aa)
	TRMU	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. (421 aa)
	TARBP1	TAR (HIV-1) RNA binding protein 1. (1588 aa)
	RPUSD4	RNA pseudouridine synthase D4. (377 aa)

Your Current Organism:

Macaca fascicularis

NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERGIC1	GTPBP3	ENSMFAP00000037189	ENSMFAP00000009884	Endoplasmic reticulum-golgi intermediate compartment 1.	GTP binding protein 3, mitochondrial.	0.960
ERGIC1	GTPBP6	ENSMFAP00000037189	ENSMFAP00000041664	Endoplasmic reticulum-golgi intermediate compartment 1.	GTP binding protein 6 (putative).	0.477
ERGIC1	TRMU	ENSMFAP00000037189	ENSMFAP00000041911	Endoplasmic reticulum-golgi intermediate compartment 1.	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.	0.827
GTPBP3	ERGIC1	ENSMFAP00000009884	ENSMFAP00000037189	GTP binding protein 3, mitochondrial.	Endoplasmic reticulum-golgi intermediate compartment 1.	0.960
GTPBP3	GTPBP6	ENSMFAP00000009884	ENSMFAP00000041664	GTP binding protein 3, mitochondrial.	GTP binding protein 6 (putative).	0.619
GTPBP3	GTPBP8	ENSMFAP00000009884	ENSMFAP00000000203	GTP binding protein 3, mitochondrial.	GTP binding protein 8 (putative).	0.944
GTPBP3	MALSU1	ENSMFAP00000009884	ENSMFAP00000024238	GTP binding protein 3, mitochondrial.	Mitochondrial assembly of ribosomal large subunit 1.	0.866
GTPBP3	METTL15	ENSMFAP00000009884	ENSMFAP00000024599	GTP binding protein 3, mitochondrial.	Uncharacterized protein.	0.530
GTPBP3	MRM1	ENSMFAP00000009884	ENSMFAP00000018032	GTP binding protein 3, mitochondrial.	Mitochondrial rRNA methyltransferase 1.	0.795
GTPBP3	MRM3	ENSMFAP00000009884	ENSMFAP00000028025	GTP binding protein 3, mitochondrial.	Mitochondrial rRNA methyltransferase 3.	0.901
GTPBP3	MTG1	ENSMFAP00000009884	ENSMFAP00000007375	GTP binding protein 3, mitochondrial.	Mitochondrial ribosome associated GTPase 1.	0.896
GTPBP3	MTG2	ENSMFAP00000009884	ENSMFAP00000022379	GTP binding protein 3, mitochondrial.	Mitochondrial ribosome associated GTPase 2.	0.480
GTPBP3	MTO1	ENSMFAP00000009884	ENSMFAP00000030699	GTP binding protein 3, mitochondrial.	Protein MTO1 homolog, mitochondrial; Involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U34) of the wobble uridine base in mitochondrial tRNAs.	0.986
GTPBP3	PUS3	ENSMFAP00000009884	ENSMFAP00000003112	GTP binding protein 3, mitochondrial.	Pseudouridine synthase 3.	0.443
GTPBP3	PUS7	ENSMFAP00000009884	ENSMFAP00000040069	GTP binding protein 3, mitochondrial.	Pseudouridine synthase 7.	0.775
GTPBP3	PUS7L	ENSMFAP00000009884	ENSMFAP00000028938	GTP binding protein 3, mitochondrial.	Pseudouridine synthase 7 like.	0.775
GTPBP3	RPUSD1	ENSMFAP00000009884	ENSMFAP00000035018	GTP binding protein 3, mitochondrial.	RNA pseudouridine synthase domain containing 1.	0.798
GTPBP3	RPUSD2	ENSMFAP00000009884	ENSMFAP00000027301	GTP binding protein 3, mitochondrial.	RNA pseudouridine synthase domain containing 2.	0.802
GTPBP3	RPUSD3	ENSMFAP00000009884	ENSMFAP00000018711	GTP binding protein 3, mitochondrial.	RNA pseudouridine synthase D3.	0.802
GTPBP3	RPUSD4	ENSMFAP00000009884	ENSMFAP00000044292	GTP binding protein 3, mitochondrial.	RNA pseudouridine synthase D4.	0.798

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