STRINGSTRING
SF3A2 SF3A2 ENSMFAP00000008116 ENSMFAP00000008116 SNRPA1 SNRPA1 SF3B5 SF3B5 SNRPB2 SNRPB2 DDX42 DDX42 SF3A1 SF3A1 ENSMFAP00000021521 ENSMFAP00000021521 SF3A3 SF3A3 DDX46 DDX46 SF3B3 SF3B3 SNRPN SNRPN SF3B4 SF3B4 SF3B6 SF3B6 SF3B1 SF3B1 PHF5A PHF5A SF3B2 SF3B2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3A2Splicing factor 3a subunit 2. (464 aa)
ENSMFAP00000008116Uncharacterized protein. (352 aa)
SNRPA1U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA. (255 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
DDX42DEAD-box helicase 42. (937 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
ENSMFAP00000021521Uncharacterized protein. (154 aa)
SF3A3Matrin-type domain-containing protein. (504 aa)
DDX46DEAD-box helicase 46. (1032 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein N; May be involved in tissue-specific alternative RNA processing events; Belongs to the snRNP SmB/SmN family. (244 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SF3B1Uncharacterized protein. (74 aa)
PHF5APHD finger protein 5A. (110 aa)
SF3B2Splicing factor 3b subunit 2. (896 aa)
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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