Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | DDX3X | ENSMFAP00000013223 | ENSMFAP00000010020 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. | 0.511 |
| AGO2 | EIF4EBP1 | ENSMFAP00000013223 | ENSMFAP00000045225 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Eukaryotic translation initiation factor 4E binding protein 1. | 0.430 |
| AGO2 | FMR1 | ENSMFAP00000013223 | ENSMFAP00000008844 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Fragile X mental retardation 1. | 0.708 |
| AGO2 | NCBP1 | ENSMFAP00000013223 | ENSMFAP00000015733 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Nuclear cap binding protein subunit 1. | 0.475 |
| AGO2 | POLR2D | ENSMFAP00000013223 | ENSMFAP00000017654 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | RNA polymerase II subunit D. | 0.516 |
| AGO2 | POLR2G | ENSMFAP00000013223 | ENSMFAP00000007127 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | S1 domain-containing protein. | 0.425 |
| ALKBH1 | METTL3 | ENSMFAP00000003610 | ENSMFAP00000023276 | AlkB homolog 1, histone H2A dioxygenase. | Methyltransferase like 3; Belongs to the MT-A70-like family. | 0.532 |
| ALKBH1 | YTHDF1 | ENSMFAP00000003610 | ENSMFAP00000006779 | AlkB homolog 1, histone H2A dioxygenase. | YTH N6-methyladenosine RNA binding protein 1. | 0.414 |
| ATF4 | EIF2AK2 | ENSMFAP00000045336 | ENSMFAP00000014830 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 2. | 0.432 |
| ATF4 | EIF2AK3 | ENSMFAP00000045336 | ENSMFAP00000017131 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 3. | 0.963 |
| ATF4 | EIF2AK4 | ENSMFAP00000045336 | ENSMFAP00000021490 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 alpha kinase 4. | 0.556 |
| ATF4 | EIF2S1 | ENSMFAP00000045336 | ENSMFAP00000036872 | Activating transcription factor 4. | Eukaryotic translation initiation factor 2 subunit alpha. | 0.964 |
| ATF4 | ENSMFAP00000036680 | ENSMFAP00000045336 | ENSMFAP00000036680 | Activating transcription factor 4. | RWD domain-containing protein. | 0.556 |
| ATF4 | PPP1CA | ENSMFAP00000045336 | ENSMFAP00000004325 | Activating transcription factor 4. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.652 |
| ATF4 | PPP1R15A | ENSMFAP00000045336 | ENSMFAP00000029214 | Activating transcription factor 4. | Protein phosphatase 1 regulatory subunit 15A. | 0.432 |
| ATF4 | PPP1R15B | ENSMFAP00000045336 | ENSMFAP00000043428 | Activating transcription factor 4. | Protein phosphatase 1 regulatory subunit 15B. | 0.413 |
| BOLL | NCBP1 | ENSMFAP00000015787 | ENSMFAP00000015733 | Protein boule-like; Probable RNA-binding protein, which may be required during spermatogenesis. May act by binding to the 3'-UTR of mRNAs and regulating their translation (By similarity). | Nuclear cap binding protein subunit 1. | 0.466 |
| BOLL | RPL13A | ENSMFAP00000015787 | ENSMFAP00000008800 | Protein boule-like; Probable RNA-binding protein, which may be required during spermatogenesis. May act by binding to the 3'-UTR of mRNAs and regulating their translation (By similarity). | 60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppres [...] | 0.593 |
| BZW1 | BZW2 | ENSMFAP00000012074 | ENSMFAP00000043322 | Basic leucine zipper and W2 domains 1. | Basic leucine zipper and W2 domain-containing protein 2; May be involved in neuronal differentiation. | 0.668 |
| BZW2 | BZW1 | ENSMFAP00000043322 | ENSMFAP00000012074 | Basic leucine zipper and W2 domain-containing protein 2; May be involved in neuronal differentiation. | Basic leucine zipper and W2 domains 1. | 0.668 |
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