STRINGSTRING
ZRANB3 ZRANB3 DDX27 DDX27 DDX19B DDX19B DDX23 DDX23 DDX17 DDX17 DHX9 DHX9 CHD9 CHD9 DHX40 DHX40 EP400 EP400 DDX25 DDX25 DHX57 DHX57 DDX4 DDX4 SNRNP200 SNRNP200 FANCM FANCM DDX52 DDX52 HLTF HLTF EIF4A1 EIF4A1 HELQ HELQ DHX30 DHX30 DDX31 DDX31 DDX56 DDX56 POLQ POLQ DQX1 DQX1 ASCC3 ASCC3 SMARCA1 SMARCA1 DDX24 DDX24 DDX10 DDX10 DDX59 DDX59 ENSMFAP00000007647 ENSMFAP00000007647 CHD8 CHD8 TDRD9 TDRD9 ENSMFAP00000009809 ENSMFAP00000009809 DDX3X DDX3X DDX60 DDX60 ENSMFAP00000011824 ENSMFAP00000011824 CHD3 CHD3 DDX5 DDX5 DDX19A DDX19A DDX51 DDX51 RAD54L RAD54L DDX42 DDX42 CHD1 CHD1 RECQL RECQL FSBP FSBP MTREX MTREX DHX35 DHX35 DDX20 DDX20 DDX41 DDX41 ENSMFAP00000017832 ENSMFAP00000017832 DHX38 DHX38 ATRX ATRX DHX36 DHX36 SRCAP SRCAP DHX34 DHX34 CHD6 CHD6 DDX11 DDX11 ERCC6 ERCC6 ENSMFAP00000021571 ENSMFAP00000021571 CHD2 CHD2 RECQL4 RECQL4 ENSMFAP00000022538 ENSMFAP00000022538 BLM BLM DDX43 DDX43 DDX18 DDX18 ERCC6L2 ERCC6L2 SMARCA4 SMARCA4 WRN WRN CHD1L CHD1L DDX54 DDX54 RTEL1 RTEL1 SMARCA5 SMARCA5 EIF4A3 EIF4A3 DDX50 DDX50 BRIP1 BRIP1 DDX39A DDX39A HELLS HELLS INO80 INO80 RECQL5 RECQL5 DDX46 DDX46 DDX49 DDX49 EIF4A2 EIF4A2 DHX8 DHX8 DDX21 DDX21 BTAF1 BTAF1 DDX60L DDX60L ERCC6L ERCC6L CHD7 CHD7 RAD54L2 RAD54L2 DDX6 DDX6 TTF2 TTF2 DHX33 DHX33 DDX47 DDX47 SMARCAD1 SMARCAD1 DICER1 DICER1 ERCC3 ERCC3 CHD4 CHD4 DHX16 DHX16 HFM1 HFM1 DHX29 DHX29 IFIH1 IFIH1 CHD5 CHD5 DDX39B DDX39B SKIV2L SKIV2L SMARCAL1 SMARCAL1 DHX58 DHX58 SMARCA2 SMARCA2 ERCC2 ERCC2 DDX55 DDX55
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZRANB3Zinc finger RANBP2-type containing 3. (1124 aa)
DDX27DEAD-box helicase 27; Belongs to the DEAD box helicase family. (775 aa)
DDX19BTestis cDNA clone: QtsA-16451, similar to human DEAD (Asp-Glu-Ala-As) box polypeptide 19 (DDX19). (484 aa)
DDX23DEAD-box helicase 23. (820 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (733 aa)
DHX9DExH-box helicase 9. (1275 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2901 aa)
DHX40DEAH-box helicase 40. (779 aa)
EP400E1A binding protein p400. (3136 aa)
DDX25Uncharacterized protein. (483 aa)
DHX57DExH-box helicase 57. (1427 aa)
DDX4Probable ATP-dependent RNA helicase DDX4; ATP-dependent RNA helicase required during spermatogenesis to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Involved in the secondary piRNAs metabolic process, the production of piRNAs in fetal male germ cells through a ping-pong amplification cycl [...] (725 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
FANCMFA complementation group M. (2050 aa)
DDX52DExD-box helicase 52. (599 aa)
HLTFHelicase like transcription factor. (1013 aa)
EIF4A1Eukaryotic initiation factor 4A-I; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). (406 aa)
HELQHelicase, POLQ like. (1101 aa)
DHX30DExH-box helicase 30. (1222 aa)
DDX31RNA helicase. (851 aa)
DDX56DEAD-box helicase 56. (546 aa)
POLQDNA polymerase theta. (2721 aa)
DQX1DEAQ-box RNA dependent ATPase 1. (717 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (2202 aa)
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1110 aa)
DDX24DEAD-box helicase 24. (856 aa)
DDX10RNA helicase. (962 aa)
DDX59DEAD-box helicase 59. (620 aa)
ENSMFAP00000007647Uncharacterized protein. (299 aa)
CHD8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2589 aa)
TDRD9Tudor domain containing 9. (1366 aa)
ENSMFAP00000009809Helicase ATP-binding domain-containing protein. (686 aa)
DDX3XDEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. (733 aa)
DDX60DExD/H-box helicase 60. (1712 aa)
ENSMFAP00000011824Uncharacterized protein; Belongs to the DEAD box helicase family. (387 aa)
CHD3Chromodomain helicase DNA binding protein 3. (2000 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Involved in the alternative regulation of pre-mRNA splicing; its RNA helicase activity is necessary for increasing tau exon 10 inclusion and occurs in a RBM4-dependent manner. Binds to the tau pre- mRNA in the stem-loop region downstream of exon 10. The rate of ATP hydrolysis is highly stimulated by single-stranded RNA. Involved in transcriptional regulation; the function is independent of the RNA helicase activity. Transcriptional coactivator for androgen receptor AR but probably not ESR1. Synergizes with DDX17 and SRA1 RNA to activate MYOD1 t [...] (614 aa)
DDX19ABrain cDNA, clone: QtrA-13194, similar to human hypothetical protein FLJ11126 (FLJ11126). (478 aa)
DDX51DEAD-box helicase 51; Belongs to the DEAD box helicase family. (664 aa)
RAD54LRAD54 like. (747 aa)
DDX42DEAD-box helicase 42. (937 aa)
CHD1Chromodomain helicase DNA binding protein 1. (1712 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
FSBPUncharacterized protein. (908 aa)
MTREXMtr4 exosome RNA helicase. (1051 aa)
DHX35DEAH-box helicase 35. (703 aa)
DDX20DEAD-box helicase 20. (856 aa)
DDX41DEAD-box helicase 41. (622 aa)
ENSMFAP00000017832Uncharacterized protein; Belongs to the DEAD box helicase family. (387 aa)
DHX38DEAH-box helicase 38. (1234 aa)
ATRXATRX chromatin remodeler. (2490 aa)
DHX36DEAH-box helicase 36. (1008 aa)
SRCAPUncharacterized protein. (3229 aa)
DHX34DExH-box helicase 34. (1143 aa)
CHD6Chromodomain helicase DNA binding protein 6. (2718 aa)
DDX11DEAD/H-box helicase 11. (906 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1496 aa)
ENSMFAP00000021571Uncharacterized protein; Belongs to the DEAD box helicase family. (576 aa)
CHD2Uncharacterized protein. (1834 aa)
RECQL4RecQ like helicase 4. (1208 aa)
ENSMFAP00000022538Uncharacterized protein. (796 aa)
BLMBLM RecQ like helicase. (1416 aa)
DDX43DEAD-box helicase 43; Belongs to the DEAD box helicase family. (648 aa)
DDX18RNA helicase. (670 aa)
ERCC6L2Uncharacterized protein. (1413 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1679 aa)
WRNWRN RecQ like helicase. (1428 aa)
CHD1LChromodomain helicase DNA binding protein 1 like. (878 aa)
DDX54ATP-dependent RNA helicase DDX54; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (883 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1352 aa)
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1052 aa)
EIF4A3Eukaryotic initiation factor 4A-III, N-terminally processed; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expr [...] (412 aa)
DDX50DExD-box helicase 50. (737 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1247 aa)
DDX39ADExD-box helicase 39A. (435 aa)
HELLSHelicase, lymphoid specific. (882 aa)
INO80INO80 complex ATPase subunit. (1556 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
DDX46DEAD-box helicase 46. (1032 aa)
DDX49DEAD-box helicase 49; Belongs to the DEAD box helicase family. (483 aa)
EIF4A2Eukaryotic initiation factor 4A-II; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). (408 aa)
DHX8DEAH-box helicase 8. (1222 aa)
DDX21DExD-box helicase 21. (783 aa)
BTAF1B-TFIID TATA-box binding protein associated factor 1. (1849 aa)
DDX60LDExD/H-box 60 like. (1712 aa)
ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase. (1252 aa)
CHD7Chromodomain helicase DNA binding protein 7. (2998 aa)
RAD54L2RAD54 like 2. (1467 aa)
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (483 aa)
TTF2Uncharacterized protein. (1170 aa)
DHX33DEAH-box helicase 33. (707 aa)
DDX47DEAD-box helicase 47; Belongs to the DEAD box helicase family. (462 aa)
SMARCAD1Uncharacterized protein. (1026 aa)
DICER1Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1920 aa)
ERCC3General transcription and DNA repair factor IIH helicase subunit XPB; ATP-dependent 3'-5' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATPase activity of XPB/ERCC3, but not its helicase activity, is required fo [...] (786 aa)
CHD4Uncharacterized protein. (1912 aa)
DHX16DEAH-box helicase 16. (1044 aa)
HFM1Helicase for meiosis 1. (1432 aa)
DHX29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1367 aa)
IFIH1Interferon induced with helicase C domain 1. (1025 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1983 aa)
DDX39BATP-dependent RNA helicase UAP56/SUB2. (428 aa)
SKIV2LSki2 like RNA helicase. (1246 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (949 aa)
DHX58DExH-box helicase 58. (678 aa)
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1569 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (768 aa)
DDX55RNA helicase. (600 aa)
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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