Groups of genes that are frequently observed in each other's genomic neighborhood.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCDC138
Coiled-coil domain containing 138. (665 aa)
FOPNL
LisH domain-containing protein. (198 aa)
KLF5
Uncharacterized protein. (1062 aa)
KLF7
Kruppel like factor 7. (302 aa)
CCDC61
Coiled-coil domain containing 61. (638 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544 Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys