(6 nodes) Mixed, incl. POU domain, class 2, associating factor 1, and FAM187A/B network (Macaca mulatta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C14H11orf53	Chromosome 14 C11orf53 homolog. (288 aa)
	FAM187A	Family with sequence similarity 187 member A. (414 aa)
	RLF	Rearranged L-myc fusion. (1915 aa)
	HIGD1C	HIG1 domain family member 1C. (97 aa)
	COLCA2	Uncharacterized protein. (497 aa)
	SFXN2	Uncharacterized protein. (383 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C14H11orf53	COLCA2	ENSMMUP00000007199	ENSMMUP00000060835	Chromosome 14 C11orf53 homolog.	Uncharacterized protein.	0.633
COLCA2	C14H11orf53	ENSMMUP00000060835	ENSMMUP00000007199	Uncharacterized protein.	Chromosome 14 C11orf53 homolog.	0.633
COLCA2	RLF	ENSMMUP00000060835	ENSMMUP00000040395	Uncharacterized protein.	Rearranged L-myc fusion.	0.513
COLCA2	SFXN2	ENSMMUP00000060835	ENSMMUP00000061962	Uncharacterized protein.	Uncharacterized protein.	0.521
RLF	COLCA2	ENSMMUP00000040395	ENSMMUP00000060835	Rearranged L-myc fusion.	Uncharacterized protein.	0.513
RLF	SFXN2	ENSMMUP00000040395	ENSMMUP00000061962	Rearranged L-myc fusion.	Uncharacterized protein.	0.522
SFXN2	COLCA2	ENSMMUP00000061962	ENSMMUP00000060835	Uncharacterized protein.	Uncharacterized protein.	0.521
SFXN2	RLF	ENSMMUP00000061962	ENSMMUP00000040395	Uncharacterized protein.	Rearranged L-myc fusion.	0.522