36 items (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBL3	Transducin beta like 3. (808 aa)
	BMS1	BMS1 ribosome biogenesis factor. (1284 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	RPP40	Ribonuclease P/MRP subunit p40. (363 aa)
	BYSL	Bystin like. (440 aa)
	RRS1	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
	RCL1	RNA 3'-terminal phosphate cyclase-like protein. (373 aa)
	RRP36	Ribosomal RNA processing 36. (338 aa)
	MRPS11	28S ribosomal protein S11, mitochondrial isoform a; Belongs to the universal ribosomal protein uS11 family. (194 aa)
	LOC114676316	Uncharacterized protein. (115 aa)
	ENSMMUP00000067505	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (140 aa)
	UTP20	UTP20 small subunit processome component. (2805 aa)
	DHX37	DEAH-box helicase 37. (1210 aa)
	UTP4	UTP4 small subunit processome component. (694 aa)
	GTF2H5	General transcription factor IIH subunit 5. (71 aa)
	NOP14	NOP14 nucleolar protein. (857 aa)
	ENSMMUP00000049256	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (181 aa)
	TSR2	Uncharacterized protein. (235 aa)
	ERCC2	TFIIH basal transcription factor complex helicase XPD subunit isoform 1. (760 aa)
	PWP2	Uncharacterized protein. (1087 aa)
	FAM207A	Family with sequence similarity 207 member A. (215 aa)
	WDR46	WD repeat domain 46. (616 aa)
	ABT1	Activator of basal transcription 1. (276 aa)
	RPS14	Ribosomal protein S14. (179 aa)
	UTP23	UTP23 small subunit processome component. (249 aa)
	KRI1	KRI1 homolog. (712 aa)
	WDR43	WD repeat domain 43. (678 aa)
	UTP25	Digestive organ expansion factor homolog. (755 aa)
	UTP6	U3 small nucleolar RNA-associated protein 6 homolog. (598 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	HELB	DNA helicase B. (1087 aa)
	NGDN	Neuroguidin isoform 1. (315 aa)
	NOL10	Nucleolar protein 10. (688 aa)
	NOP9	Pumilio domain-containing protein C14orf21. (637 aa)
	LOC698741	Uncharacterized protein. (191 aa)
	FCF1	rRNA-processing protein FCF1 homolog. (198 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABT1	BYSL	ENSMMUP00000080574	ENSMMUP00000005895	Activator of basal transcription 1.	Bystin like.	0.974
ABT1	KRI1	ENSMMUP00000080574	ENSMMUP00000031847	Activator of basal transcription 1.	KRI1 homolog.	0.567
ABT1	NGDN	ENSMMUP00000080574	ENSMMUP00000019386	Activator of basal transcription 1.	Neuroguidin isoform 1.	0.905
ABT1	NOL10	ENSMMUP00000080574	ENSMMUP00000013985	Activator of basal transcription 1.	Nucleolar protein 10.	0.736
ABT1	NOP14	ENSMMUP00000080574	ENSMMUP00000061043	Activator of basal transcription 1.	NOP14 nucleolar protein.	0.960
ABT1	PWP2	ENSMMUP00000080574	ENSMMUP00000043942	Activator of basal transcription 1.	Uncharacterized protein.	0.767
ABT1	RRP36	ENSMMUP00000080574	ENSMMUP00000077686	Activator of basal transcription 1.	Ribosomal RNA processing 36.	0.986
ABT1	RRS1	ENSMMUP00000080574	ENSMMUP00000001186	Activator of basal transcription 1.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.571
ABT1	TBL3	ENSMMUP00000080574	ENSMMUP00000010431	Activator of basal transcription 1.	Transducin beta like 3.	0.591
ABT1	UTP23	ENSMMUP00000080574	ENSMMUP00000031979	Activator of basal transcription 1.	UTP23 small subunit processome component.	0.752
ABT1	UTP25	ENSMMUP00000080574	ENSMMUP00000029062	Activator of basal transcription 1.	Digestive organ expansion factor homolog.	0.968
ABT1	UTP4	ENSMMUP00000080574	ENSMMUP00000063908	Activator of basal transcription 1.	UTP4 small subunit processome component.	0.456
ABT1	UTP6	ENSMMUP00000080574	ENSMMUP00000026846	Activator of basal transcription 1.	U3 small nucleolar RNA-associated protein 6 homolog.	0.959
BMS1	BYSL	ENSMMUP00000009744	ENSMMUP00000005895	BMS1 ribosome biogenesis factor.	Bystin like.	0.996
BMS1	DHX37	ENSMMUP00000009744	ENSMMUP00000064799	BMS1 ribosome biogenesis factor.	DEAH-box helicase 37.	0.788
BMS1	ENSMMUP00000049256	ENSMMUP00000009744	ENSMMUP00000049256	BMS1 ribosome biogenesis factor.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.845
BMS1	ENSMMUP00000067505	ENSMMUP00000009744	ENSMMUP00000067505	BMS1 ribosome biogenesis factor.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.816
BMS1	FCF1	ENSMMUP00000009744	ENSMMUP00000011656	BMS1 ribosome biogenesis factor.	rRNA-processing protein FCF1 homolog.	0.991
BMS1	KRI1	ENSMMUP00000009744	ENSMMUP00000031847	BMS1 ribosome biogenesis factor.	KRI1 homolog.	0.819
BMS1	LOC114676316	ENSMMUP00000009744	ENSMMUP00000069021	BMS1 ribosome biogenesis factor.	Uncharacterized protein.	0.816