STRINGSTRING
ERCC6 ERCC6 CD3EAP CD3EAP RRN3 RRN3 TAF1 TAF1 TAF1A TAF1A SMARCB1 SMARCB1 SMARCA4 SMARCA4 ZNRD1 ZNRD1 POLR1A POLR1A POLR1E POLR1E BAZ2A BAZ2A POLR1C POLR1C TTF1 TTF1 TAF1L TAF1L ERCC2 ERCC2 TAF1B TAF1B UBTF UBTF GTF2H1 GTF2H1 GTF2H5 GTF2H5 PIH1D1 PIH1D1 TCOF1 TCOF1 TAF1C TAF1C CAVIN1 CAVIN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERCC6ERCC excision repair 6, chromatin remodeling factor. (2061 aa)
CD3EAPCD3e molecule associated protein. (515 aa)
RRN3Uncharacterized protein. (668 aa)
TAF1Transcription initiation factor TFIID subunit. (1895 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1679 aa)
ZNRD1DNA-directed RNA polymerase I subunit RPA12; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase I which synthesizes ribosomal RNA precursors. (132 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1721 aa)
POLR1ERNA polymerase I subunit E. (484 aa)
BAZ2ABromodomain adjacent to zinc finger domain 2A. (1910 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
TTF1Transcription termination factor 1. (916 aa)
TAF1LTATA-box binding protein associated factor 1 like. (1776 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit isoform 1. (760 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (590 aa)
UBTFNucleolar transcription factor 1 isoform a. (764 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
PIH1D1PIH1 domain containing 1. (340 aa)
TCOF1LisH domain-containing protein. (1652 aa)
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (843 aa)
CAVIN1Polymerase I and transcript release factor. (391 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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