17 items (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPOCK1	Uncharacterized protein. (457 aa)
	SCN8A	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (1980 aa)
	SCN2A	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (2005 aa)
	ANK3	Ankyrin 3. (4375 aa)
	DAG1	Dystroglycan preproprotein. (894 aa)
	KCNQ3	Potassium voltage-gated channel subfamily KQT member 3 isoform 1; Belongs to the potassium channel family. (872 aa)
	MYOC	Myocilin. (491 aa)
	KCNQ2	Potassium voltage-gated channel subfamily Q member 2. (1110 aa)
	F7H9V3_MACMU	Uncharacterized protein. (584 aa)
	SPTBN4	Spectrin beta chain, brain 3 isoform sigma5. (678 aa)
	DLG1	Disks large homolog 1 isoform 2; Belongs to the MAGUK family. (926 aa)
	CNTN2	Uncharacterized protein. (1040 aa)
	SCN1A	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (2008 aa)
	BIN1	Bridging integrator 1. (668 aa)
	SCN1B	Sodium voltage-gated channel beta subunit 1. (402 aa)
	HAPLN2	Uncharacterized protein. (357 aa)
	NFASC	Neurofascin. (1464 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANK3	CNTN2	ENSMMUP00000004790	ENSMMUP00000051164	Ankyrin 3.	Uncharacterized protein.	0.435
ANK3	F7H9V3_MACMU	ENSMMUP00000004790	ENSMMUP00000027373	Ankyrin 3.	Uncharacterized protein.	0.810
ANK3	KCNQ2	ENSMMUP00000004790	ENSMMUP00000020944	Ankyrin 3.	Potassium voltage-gated channel subfamily Q member 2.	0.607
ANK3	KCNQ3	ENSMMUP00000004790	ENSMMUP00000011684	Ankyrin 3.	Potassium voltage-gated channel subfamily KQT member 3 isoform 1; Belongs to the potassium channel family.	0.567
ANK3	NFASC	ENSMMUP00000004790	ENSMMUP00000063831	Ankyrin 3.	Neurofascin.	0.815
ANK3	SCN1A	ENSMMUP00000004790	ENSMMUP00000052582	Ankyrin 3.	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	0.422
ANK3	SCN2A	ENSMMUP00000004790	ENSMMUP00000003651	Ankyrin 3.	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	0.629
ANK3	SCN8A	ENSMMUP00000004790	ENSMMUP00000000556	Ankyrin 3.	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	0.652
ANK3	SPTBN4	ENSMMUP00000004790	ENSMMUP00000027374	Ankyrin 3.	Spectrin beta chain, brain 3 isoform sigma5.	0.811
CNTN2	ANK3	ENSMMUP00000051164	ENSMMUP00000004790	Uncharacterized protein.	Ankyrin 3.	0.435
CNTN2	NFASC	ENSMMUP00000051164	ENSMMUP00000063831	Uncharacterized protein.	Neurofascin.	0.687
F7H9V3_MACMU	ANK3	ENSMMUP00000027373	ENSMMUP00000004790	Uncharacterized protein.	Ankyrin 3.	0.810
F7H9V3_MACMU	NFASC	ENSMMUP00000027373	ENSMMUP00000063831	Uncharacterized protein.	Neurofascin.	0.480
F7H9V3_MACMU	SPTBN4	ENSMMUP00000027373	ENSMMUP00000027374	Uncharacterized protein.	Spectrin beta chain, brain 3 isoform sigma5.	0.900
KCNQ2	ANK3	ENSMMUP00000020944	ENSMMUP00000004790	Potassium voltage-gated channel subfamily Q member 2.	Ankyrin 3.	0.607
KCNQ2	KCNQ3	ENSMMUP00000020944	ENSMMUP00000011684	Potassium voltage-gated channel subfamily Q member 2.	Potassium voltage-gated channel subfamily KQT member 3 isoform 1; Belongs to the potassium channel family.	0.977
KCNQ2	NFASC	ENSMMUP00000020944	ENSMMUP00000063831	Potassium voltage-gated channel subfamily Q member 2.	Neurofascin.	0.771
KCNQ2	SCN1A	ENSMMUP00000020944	ENSMMUP00000052582	Potassium voltage-gated channel subfamily Q member 2.	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	0.547
KCNQ2	SCN1B	ENSMMUP00000020944	ENSMMUP00000063163	Potassium voltage-gated channel subfamily Q member 2.	Sodium voltage-gated channel beta subunit 1.	0.419
KCNQ2	SCN2A	ENSMMUP00000020944	ENSMMUP00000003651	Potassium voltage-gated channel subfamily Q member 2.	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	0.694