18 items (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GRID2	Glutamate ionotropic receptor delta type subunit 2. (1007 aa)
	GRIK1	Glutamate ionotropic receptor kainate type subunit 1. (949 aa)
	GRIA4	Glutamate ionotropic receptor AMPA type subunit 4. (884 aa)
	GRIN2D	Glutamate ionotropic receptor NMDA type subunit 2D. (1336 aa)
	GRIA3	Glutamate ionotropic receptor AMPA type subunit 3. (894 aa)
	GRIK3	Glutamate ionotropic receptor kainate type subunit 3. (1324 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A. (1115 aa)
	GRIK5	Glutamate ionotropic receptor kainate type subunit 5. (1388 aa)
	GRIN2B	Glutamate ionotropic receptor NMDA type subunit 2B. (1484 aa)
	GRID1	Glutamate receptor delta-1 subunit. (1009 aa)
	GRIN1	Glutamate ionotropic receptor NMDA type subunit 1. (943 aa)
	GRIK2	Glutamate ionotropic receptor kainate type subunit 2. (908 aa)
	GRIN2A	Glutamate ionotropic receptor NMDA type subunit 2A. (1464 aa)
	GRIN3B	Glutamate ionotropic receptor NMDA type subunit 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1042 aa)
	GRIK4	Glutamate ionotropic receptor kainate type subunit 4. (956 aa)
	GRIA1	Uncharacterized protein. (916 aa)
	GRIA2	Uncharacterized protein. (883 aa)
	GRIN2C	Glutamate ionotropic receptor NMDA type subunit 2C. (1317 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GRIA1	GRIA2	ENSMMUP00000060453	ENSMMUP00000061150	Uncharacterized protein.	Uncharacterized protein.	0.998
GRIA1	GRIA3	ENSMMUP00000060453	ENSMMUP00000011882	Uncharacterized protein.	Glutamate ionotropic receptor AMPA type subunit 3.	0.995
GRIA1	GRIA4	ENSMMUP00000060453	ENSMMUP00000006497	Uncharacterized protein.	Glutamate ionotropic receptor AMPA type subunit 4.	0.938
GRIA1	GRID2	ENSMMUP00000060453	ENSMMUP00000003163	Uncharacterized protein.	Glutamate ionotropic receptor delta type subunit 2.	0.589
GRIA1	GRIK2	ENSMMUP00000060453	ENSMMUP00000045416	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 2.	0.688
GRIA1	GRIK3	ENSMMUP00000060453	ENSMMUP00000012661	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 3.	0.711
GRIA1	GRIK4	ENSMMUP00000060453	ENSMMUP00000054633	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 4.	0.679
GRIA1	GRIK5	ENSMMUP00000060453	ENSMMUP00000022947	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 5.	0.546
GRIA1	GRIN1	ENSMMUP00000060453	ENSMMUP00000040251	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 1.	0.802
GRIA1	GRIN2A	ENSMMUP00000060453	ENSMMUP00000046309	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 2A.	0.810
GRIA1	GRIN2B	ENSMMUP00000060453	ENSMMUP00000025129	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 2B.	0.797
GRIA1	GRIN2C	ENSMMUP00000060453	ENSMMUP00000071066	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 2C.	0.718
GRIA1	GRIN2D	ENSMMUP00000060453	ENSMMUP00000007863	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 2D.	0.715
GRIA1	GRIN3A	ENSMMUP00000060453	ENSMMUP00000021930	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A.	0.583
GRIA1	GRIN3B	ENSMMUP00000060453	ENSMMUP00000050738	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.581
GRIA2	GRIA1	ENSMMUP00000061150	ENSMMUP00000060453	Uncharacterized protein.	Uncharacterized protein.	0.998
GRIA2	GRIA3	ENSMMUP00000061150	ENSMMUP00000011882	Uncharacterized protein.	Glutamate ionotropic receptor AMPA type subunit 3.	0.999
GRIA2	GRIA4	ENSMMUP00000061150	ENSMMUP00000006497	Uncharacterized protein.	Glutamate ionotropic receptor AMPA type subunit 4.	0.986
GRIA2	GRID2	ENSMMUP00000061150	ENSMMUP00000003163	Uncharacterized protein.	Glutamate ionotropic receptor delta type subunit 2.	0.607
GRIA2	GRIK2	ENSMMUP00000061150	ENSMMUP00000045416	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 2.	0.708