(23 nodes) Peptidase M10A network (Macaca mulatta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MMP14	Matrix metalloproteinase-14 preproprotein. (582 aa)
	MMP16	Matrix metallopeptidase 16. (607 aa)
	MMP26	Matrix metalloproteinase-26. (261 aa)
	MMP27	Matrix metallopeptidase 27. (513 aa)
	MMP25	Matrix metallopeptidase 25. (562 aa)
	MMP1	Matrix metallopeptidase 1. (469 aa)
	MMP7	Matrix metallopeptidase 7. (270 aa)
	MMP11	Matrix metallopeptidase 11. (488 aa)
	MMP15	Matrix metallopeptidase 15. (671 aa)
	MMP8	Matrix metallopeptidase 8. (467 aa)
	MMP17	Matrix metallopeptidase 17. (605 aa)
	MMP19	Matrix metallopeptidase 19. (508 aa)
	MMP2	72 kDa type IV collagenase isoform a preproprotein. (660 aa)
	MMP24	Matrix metallopeptidase 24. (644 aa)
	MMP28	ZnMc domain-containing protein. (520 aa)
	MMP10	Matrix metallopeptidase 10. (476 aa)
	MMP9	Uncharacterized protein. (707 aa)
	MMP21	ZnMc domain-containing protein. (569 aa)
	MMP23B	Matrix metallopeptidase 23B. (390 aa)
	MMP12	Matrix metallopeptidase 12. (470 aa)
	MMP20	Uncharacterized protein. (483 aa)
	MMP13	Matrix metallopeptidase 13. (471 aa)
	MMP3	Matrix metallopeptidase 3. (477 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MMP1	MMP10	ENSMMUP00000002724	ENSMMUP00000028662	Matrix metallopeptidase 1.	Matrix metallopeptidase 10.	0.585
MMP1	MMP11	ENSMMUP00000002724	ENSMMUP00000011935	Matrix metallopeptidase 1.	Matrix metallopeptidase 11.	0.522
MMP1	MMP12	ENSMMUP00000002724	ENSMMUP00000005673	Matrix metallopeptidase 1.	Matrix metallopeptidase 12.	0.482
MMP1	MMP13	ENSMMUP00000002724	ENSMMUP00000005676	Matrix metallopeptidase 1.	Matrix metallopeptidase 13.	0.457
MMP1	MMP14	ENSMMUP00000002724	ENSMMUP00000017968	Matrix metallopeptidase 1.	Matrix metalloproteinase-14 preproprotein.	0.490
MMP1	MMP15	ENSMMUP00000002724	ENSMMUP00000076570	Matrix metallopeptidase 1.	Matrix metallopeptidase 15.	0.430
MMP1	MMP19	ENSMMUP00000002724	ENSMMUP00000054520	Matrix metallopeptidase 1.	Matrix metallopeptidase 19.	0.401
MMP1	MMP2	ENSMMUP00000002724	ENSMMUP00000051376	Matrix metallopeptidase 1.	72 kDa type IV collagenase isoform a preproprotein.	0.961
MMP1	MMP20	ENSMMUP00000002724	ENSMMUP00000014422	Matrix metallopeptidase 1.	Uncharacterized protein.	0.446
MMP1	MMP21	ENSMMUP00000002724	ENSMMUP00000011195	Matrix metallopeptidase 1.	ZnMc domain-containing protein.	0.444
MMP1	MMP26	ENSMMUP00000002724	ENSMMUP00000001426	Matrix metallopeptidase 1.	Matrix metalloproteinase-26.	0.459
MMP1	MMP3	ENSMMUP00000002724	ENSMMUP00000005671	Matrix metallopeptidase 1.	Matrix metallopeptidase 3.	0.965
MMP1	MMP7	ENSMMUP00000002724	ENSMMUP00000004544	Matrix metallopeptidase 1.	Matrix metallopeptidase 7.	0.603
MMP1	MMP9	ENSMMUP00000002724	ENSMMUP00000021747	Matrix metallopeptidase 1.	Uncharacterized protein.	0.961
MMP10	MMP1	ENSMMUP00000028662	ENSMMUP00000002724	Matrix metallopeptidase 10.	Matrix metallopeptidase 1.	0.585
MMP10	MMP11	ENSMMUP00000028662	ENSMMUP00000011935	Matrix metallopeptidase 10.	Matrix metallopeptidase 11.	0.622
MMP10	MMP13	ENSMMUP00000028662	ENSMMUP00000005676	Matrix metallopeptidase 10.	Matrix metallopeptidase 13.	0.477
MMP10	MMP14	ENSMMUP00000028662	ENSMMUP00000017968	Matrix metallopeptidase 10.	Matrix metalloproteinase-14 preproprotein.	0.519
MMP10	MMP15	ENSMMUP00000028662	ENSMMUP00000076570	Matrix metallopeptidase 10.	Matrix metallopeptidase 15.	0.480
MMP10	MMP16	ENSMMUP00000028662	ENSMMUP00000017330	Matrix metallopeptidase 10.	Matrix metallopeptidase 16.	0.401