STRINGSTRING
TOPBP1 TOPBP1 MEIOB MEIOB RPA3 RPA3 SLF1 SLF1 RFC3 RFC3 RFC4 RFC4 RFC2 RFC2 GPR83 GPR83 ATM ATM BARD1 BARD1 ATR ATR BRIP1 BRIP1 ATRIP ATRIP RFC5 RFC5 RAD9B RAD9B TOP3A TOP3A ERCC4 ERCC4 RAD9A RAD9A RAD52 RAD52 BLM BLM KAT5 KAT5 EXD2 EXD2 F7DM39_MACMU F7DM39_MACMU WRN WRN NBN NBN RAD51 RAD51 BRCA1 BRCA1 RAD17 RAD17 EXO1 EXO1 RPA1 RPA1 RAD1 RAD1 RBBP8 RBBP8 RAD50 RAD50 ERCC1 ERCC1 RCBTB1 RCBTB1 ABL1 ABL1 RCBTB2 RCBTB2 RHNO1 RHNO1 DNA2 DNA2 TDRD3 TDRD3 RMI1 RMI1 ENSMMUP00000069269 ENSMMUP00000069269 RMI2 RMI2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TOPBP1Uncharacterized protein. (1527 aa)
MEIOBMeiosis specific with OB-fold. (550 aa)
RPA3Replication protein A 14 kDa subunit. (121 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1059 aa)
RFC3Replication factor C subunit 3 isoform 1. (356 aa)
RFC4Replication factor C subunit 4. (363 aa)
RFC2Replication factor C subunit 2. (233 aa)
GPR83Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (778 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
BARD1BRCA1 associated RING domain 1. (777 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1189 aa)
ATRIPATR-interacting protein isoform 1. (791 aa)
RFC5Replication factor C subunit 5 isoform 1. (340 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1001 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (916 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (390 aa)
RAD52RAD52 homolog, DNA repair protein. (442 aa)
BLMBLM RecQ like helicase. (1416 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (514 aa)
EXD2Exonuclease 3'-5' domain containing 2. (620 aa)
F7DM39_MACMUUncharacterized protein. (143 aa)
WRNWRN RecQ like helicase. (1426 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (380 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1884 aa)
RAD17RAD17 checkpoint clamp loader component. (681 aa)
EXO1Exonuclease 1. (846 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
RAD1Uncharacterized protein. (282 aa)
RBBP8Uncharacterized protein. (898 aa)
RAD50Zinc-hook domain-containing protein. (1411 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (442 aa)
RCBTB1RCC1 and BTB domain-containing protein 1. (531 aa)
ABL1Tyrosine-protein kinase. (1149 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (556 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (240 aa)
DNA2DNA replication helicase/nuclease 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1316 aa)
TDRD3Tudor domain containing 3. (754 aa)
RMI1RecQ-mediated genome instability protein 1. (625 aa)
ENSMMUP00000069269Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (437 aa)
RMI2Uncharacterized protein. (147 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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