STRINGSTRING
TOP3A TOP3A TOPBP1 TOPBP1 RTEL1 RTEL1 MEIOB MEIOB RPA3 RPA3 POLE4 POLE4 XRCC2 XRCC2 RFC3 RFC3 RFC4 RFC4 RFC2 RFC2 POLE2 POLE2 GPR83 GPR83 ATM ATM BARD1 BARD1 BRCA2 BRCA2 SLX1A SLX1A SLX4 SLX4 ATR ATR POLH POLH BRIP1 BRIP1 RAD51C RAD51C ATRIP ATRIP RFC5 RFC5 RAD9B RAD9B RPS27A RPS27A RAD51AP1 RAD51AP1 POLE POLE RPS27A-2 RPS27A-2 RAD51B RAD51B UBA52 UBA52 EME1 EME1 RAD9A RAD9A MUS81 MUS81 BLM BLM KAT5 KAT5 EXD2 EXD2 POLD3 POLD3 F7DM39_MACMU F7DM39_MACMU WRN WRN NBN NBN XRCC3 XRCC3 RAD51 RAD51 BRCA1 BRCA1 POLK POLK RAD17 RAD17 CHEK1 CHEK1 EXO1 EXO1 RPA1 RPA1 KXD1 KXD1 RAD1 RAD1 UBC UBC RBBP8 RBBP8 POLE3 POLE3 RAD50 RAD50 UBB UBB RCBTB1 RCBTB1 RCBTB2 RCBTB2 RFC1 RFC1 PALB2 PALB2 SPIDR SPIDR RHNO1 RHNO1 PCNA PCNA DNA2 DNA2 EME2 EME2 TDRD3 TDRD3 RMI1 RMI1 ENSMMUP00000067421 ENSMMUP00000067421 POLD1 POLD1 ENSMMUP00000069269 ENSMMUP00000069269 ENSMMUP00000070235 ENSMMUP00000070235 RMI2 RMI2 POLD2 POLD2 GEN1 GEN1 POLD4 POLD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1001 aa)
TOPBP1Uncharacterized protein. (1527 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1297 aa)
MEIOBMeiosis specific with OB-fold. (550 aa)
RPA3Replication protein A 14 kDa subunit. (121 aa)
POLE4DNA polymerase epsilon subunit 4. (117 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
RFC3Replication factor C subunit 3 isoform 1. (356 aa)
RFC4Replication factor C subunit 4. (363 aa)
RFC2Replication factor C subunit 2. (233 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
GPR83Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (778 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
BARD1BRCA1 associated RING domain 1. (777 aa)
BRCA2BRCA2 DNA repair associated. (3377 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (437 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1668 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
POLHDNA polymerase eta. (712 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1189 aa)
RAD51CRAD51 paralog C. (367 aa)
ATRIPATR-interacting protein isoform 1. (791 aa)
RFC5Replication factor C subunit 5 isoform 1. (340 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)
RPS27AUncharacterized protein. (156 aa)
RAD51AP1RAD51 associated protein 1. (352 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2288 aa)
RPS27A-2Ubiquitin-40S ribosomal protein S27a. (156 aa)
RAD51BRAD51 paralog B. (424 aa)
UBA52Ubiquitin-60S ribosomal protein L40. (128 aa)
EME1Essential meiotic structure-specific endonuclease 1. (584 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (390 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
BLMBLM RecQ like helicase. (1416 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (514 aa)
EXD2Exonuclease 3'-5' domain containing 2. (620 aa)
POLD3DNA polymerase delta subunit 3. (466 aa)
F7DM39_MACMUUncharacterized protein. (143 aa)
WRNWRN RecQ like helicase. (1426 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (380 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1884 aa)
POLKDNA polymerase kappa. (868 aa)
RAD17RAD17 checkpoint clamp loader component. (681 aa)
CHEK1STT3 oligosaccharyltransferase complex catalytic subunit A. (768 aa)
EXO1Exonuclease 1. (846 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
KXD1KxDL domain-containing protein. (231 aa)
RAD1Uncharacterized protein. (282 aa)
UBCUncharacterized protein. (270 aa)
RBBP8Uncharacterized protein. (898 aa)
POLE3DNA polymerase epsilon subunit 3. (147 aa)
RAD50Zinc-hook domain-containing protein. (1411 aa)
UBBUncharacterized protein. (229 aa)
RCBTB1RCC1 and BTB domain-containing protein 1. (531 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (556 aa)
RFC1Replication factor C subunit 1. (1146 aa)
PALB2PALB2_WD40 domain-containing protein. (1205 aa)
SPIDRScaffold protein involved in DNA repair. (946 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (240 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
DNA2DNA replication helicase/nuclease 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1316 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (379 aa)
TDRD3Tudor domain containing 3. (754 aa)
RMI1RecQ-mediated genome instability protein 1. (625 aa)
ENSMMUP00000067421Ubiquitin-like domain-containing protein. (135 aa)
POLD1DNA polymerase. (1145 aa)
ENSMMUP00000069269Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (437 aa)
ENSMMUP00000070235Ubiquitin-like domain-containing protein. (110 aa)
RMI2Uncharacterized protein. (147 aa)
POLD2DNA polymerase delta 2, accessory subunit. (536 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (918 aa)
POLD4DNA polymerase delta subunit p12. (107 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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