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SPIDR SPIDR RMI1 RMI1 RMI2 RMI2 GEN1 GEN1 RAD50 RAD50 RBBP8 RBBP8 GPR83 GPR83 ATM ATM BARD1 BARD1 BRCA2 BRCA2 SLX1A SLX1A SLX4 SLX4 BRIP1 BRIP1 RAD51C RAD51C TOP3A TOP3A RAD51AP1 RAD51AP1 RAD51B RAD51B EME1 EME1 MUS81 MUS81 BLM BLM EXO1 EXO1 BRCA1 BRCA1 RAD51 RAD51 XRCC3 XRCC3 NBN NBN WRN WRN KAT5 KAT5 XRCC2 XRCC2 PALB2 PALB2 EME2 EME2 DNA2 DNA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPIDRScaffold protein involved in DNA repair. (946 aa)
RMI1RecQ-mediated genome instability protein 1. (625 aa)
RMI2Uncharacterized protein. (147 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (918 aa)
RAD50Zinc-hook domain-containing protein. (1411 aa)
RBBP8Uncharacterized protein. (898 aa)
GPR83Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (778 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
BARD1BRCA1 associated RING domain 1. (777 aa)
BRCA2BRCA2 DNA repair associated. (3377 aa)
SLX1AStructure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (437 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1668 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1189 aa)
RAD51CRAD51 paralog C. (367 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1001 aa)
RAD51AP1RAD51 associated protein 1. (352 aa)
RAD51BRAD51 paralog B. (424 aa)
EME1Essential meiotic structure-specific endonuclease 1. (584 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
BLMBLM RecQ like helicase. (1416 aa)
EXO1Exonuclease 1. (846 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1884 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (380 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (754 aa)
WRNWRN RecQ like helicase. (1426 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (514 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
PALB2PALB2_WD40 domain-containing protein. (1205 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (379 aa)
DNA2DNA replication helicase/nuclease 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1316 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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