STRINGSTRING
SIX3 SIX3 POMC POMC FOXA1 FOXA1 SYN1 SYN1 SYN2 SYN2 TTR TTR EMX2 EMX2 PAX6 PAX6 LHX2 LHX2 WNT3A WNT3A LMX1A LMX1A CALB1 CALB1 SYN3 SYN3 FOXA2 FOXA2 WNT1 WNT1 FGF8 FGF8 GDNF GDNF FOXG1 FOXG1 GFAP GFAP PTCH1 PTCH1 EBF1 EBF1 BDNF BDNF GSK3B GSK3B HES5 HES5 OTX2 OTX2 PITX3 PITX3 SHH SHH SIX6 SIX6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIX3SIX homeobox 3. (384 aa)
POMCUncharacterized protein. (392 aa)
FOXA1Fork-head domain-containing protein. (470 aa)
SYN1Synapsin-1 isoform Ia. (705 aa)
SYN2Synapsin II. (584 aa)
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (149 aa)
EMX2Homeobox protein EMX2 isoform 1. (252 aa)
PAX6Uncharacterized protein. (598 aa)
LHX2LIM/homeobox protein Lhx2. (406 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
LMX1ALIM homeobox transcription factor 1 alpha. (382 aa)
CALB1Calbindin 1. (261 aa)
SYN3Synapsin III. (580 aa)
FOXA2Forkhead box A2. (457 aa)
WNT1Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (370 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
GDNFGlial cell derived neurotrophic factor. (342 aa)
FOXG1Forkhead box G1. (489 aa)
GFAPGlial fibrillary acidic protein; Belongs to the intermediate filament family. (462 aa)
PTCH1Patched 1. (1452 aa)
EBF1EBF transcription factor 1. (591 aa)
BDNFBrain-derived neurotrophic factor; Important signaling molecule that activates signaling cascades downstream of NTRK2 (By similarity). During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including lo [...] (329 aa)
GSK3BGlycogen synthase kinase-3 beta isoform 1; Belongs to the protein kinase superfamily. (433 aa)
HES5Uncharacterized protein. (166 aa)
OTX2Orthodenticle homeobox 2. (289 aa)
PITX3Homeobox protein. (302 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (465 aa)
SIX6SIX homeobox 6. (246 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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