13 items (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CASP3	Caspase 3; Belongs to the peptidase C14A family. (277 aa)
	GRIN2C	Glutamate ionotropic receptor NMDA type subunit 2C. (1317 aa)
	CYCS	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
	GRIN2D	Glutamate ionotropic receptor NMDA type subunit 2D. (1336 aa)
	CASP9	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family. (416 aa)
	GRIN2B	Glutamate ionotropic receptor NMDA type subunit 2B. (1484 aa)
	GAPDHS	Glyceraldehyde-3-phosphate dehydrogenase. (409 aa)
	GRIN2A	Glutamate ionotropic receptor NMDA type subunit 2A. (1464 aa)
	PXDN	Peroxidasin. (1533 aa)
	UPK2	Uroplakin 2. (184 aa)
	PXDNL	Peroxidasin like. (1428 aa)
	BCL2	BCL2 apoptosis regulator. (241 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL2	CASP3	ENSMMUP00000069881	ENSMMUP00000070295	BCL2 apoptosis regulator.	Caspase 3; Belongs to the peptidase C14A family.	0.955
BCL2	CASP9	ENSMMUP00000069881	ENSMMUP00000023884	BCL2 apoptosis regulator.	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	0.945
BCL2	CYCS	ENSMMUP00000069881	ENSMMUP00000073390	BCL2 apoptosis regulator.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.994
BCL2	GAPDH	ENSMMUP00000069881	ENSMMUP00000011175	BCL2 apoptosis regulator.	Glyceraldehyde-3-phosphate dehydrogenase.	0.732
BCL2	GAPDHS	ENSMMUP00000069881	ENSMMUP00000001132	BCL2 apoptosis regulator.	Glyceraldehyde-3-phosphate dehydrogenase.	0.534
BCL2	PXDN	ENSMMUP00000069881	ENSMMUP00000061072	BCL2 apoptosis regulator.	Peroxidasin.	0.732
BCL2	PXDNL	ENSMMUP00000069881	ENSMMUP00000069678	BCL2 apoptosis regulator.	Peroxidasin like.	0.731
CASP3	BCL2	ENSMMUP00000070295	ENSMMUP00000069881	Caspase 3; Belongs to the peptidase C14A family.	BCL2 apoptosis regulator.	0.955
CASP3	CASP9	ENSMMUP00000070295	ENSMMUP00000023884	Caspase 3; Belongs to the peptidase C14A family.	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	0.989
CASP3	CYCS	ENSMMUP00000070295	ENSMMUP00000073390	Caspase 3; Belongs to the peptidase C14A family.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.995
CASP3	GAPDH	ENSMMUP00000070295	ENSMMUP00000011175	Caspase 3; Belongs to the peptidase C14A family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.765
CASP3	GAPDHS	ENSMMUP00000070295	ENSMMUP00000001132	Caspase 3; Belongs to the peptidase C14A family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.524
CASP3	PXDN	ENSMMUP00000070295	ENSMMUP00000061072	Caspase 3; Belongs to the peptidase C14A family.	Peroxidasin.	0.796
CASP3	PXDNL	ENSMMUP00000070295	ENSMMUP00000069678	Caspase 3; Belongs to the peptidase C14A family.	Peroxidasin like.	0.796
CASP9	BCL2	ENSMMUP00000023884	ENSMMUP00000069881	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	BCL2 apoptosis regulator.	0.945
CASP9	CASP3	ENSMMUP00000023884	ENSMMUP00000070295	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	Caspase 3; Belongs to the peptidase C14A family.	0.989
CASP9	CYCS	ENSMMUP00000023884	ENSMMUP00000073390	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.999
CASP9	GAPDH	ENSMMUP00000023884	ENSMMUP00000011175	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.606
CASP9	GAPDHS	ENSMMUP00000023884	ENSMMUP00000001132	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.420
CASP9	PXDN	ENSMMUP00000023884	ENSMMUP00000061072	Caspase-9 isoform alpha preproprotein; Belongs to the peptidase C14A family.	Peroxidasin.	0.592