STRINGSTRING
RBMX RBMX RNF169 RNF169 KRAS KRAS ATM ATM XRCC1 XRCC1 FEN1 FEN1 UNG UNG BRCA2 BRCA2 TP53 TP53 SMUG1 SMUG1 DMD DMD PRKDC PRKDC POU5F1 POU5F1 CEP290 CEP290 RAD52 RAD52 RAD18 RAD18 POLB POLB WRN WRN RAD51 RAD51 BRCA1 BRCA1 RAD17 RAD17 EXO1 EXO1 LOC699317 LOC699317 POLI POLI APEX1 APEX1 LOC106996511 LOC106996511 RAD50 RAD50 ATP1A1 ATP1A1 LOC704341 LOC704341 LOC106996511-6 LOC106996511-6 LOC698354 LOC698354 LIG4 LIG4 LOC106996511-5 LOC106996511-5 LOC106996511-4 LOC106996511-4 LOC697115 LOC697115 LOC106996511-3 LOC106996511-3 HMCES HMCES DNA2 DNA2 LOC106996511-2 LOC106996511-2 PALB2 PALB2 EZH2 EZH2 TTR TTR POLD2 POLD2 APOBEC1 APOBEC1 LOC697721 LOC697721 BCL11A BCL11A LOC699110 LOC699110 LOC695323 LOC695323
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBMXHeterogeneous nuclear ribonucleoprotein G isoform 1. (391 aa)
RNF169Ring finger protein 169. (709 aa)
KRASKRAS proto-oncogene, GTPase. (412 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
XRCC1X-ray repair cross complementing 1. (633 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (313 aa)
BRCA2BRCA2 DNA repair associated. (3377 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (433 aa)
SMUG1Single-strand selective monofunctional uracil DNA glycosylase isoform 1. (270 aa)
DMDUncharacterized protein. (3685 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4128 aa)
POU5F1POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206 (By similarity). Critical for early embryogenesis and for embryonic stem cell pluripotency; Belongs to the POU transcription factor family. Class-5 subfamily. (360 aa)
CEP290Centrosomal protein 290. (2480 aa)
RAD52RAD52 homolog, DNA repair protein. (442 aa)
RAD18RAD18 E3 ubiquitin protein ligase. (505 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (370 aa)
WRNWRN RecQ like helicase. (1426 aa)
RAD51RAD51 recombinase; Belongs to the RecA family. (380 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1884 aa)
RAD17RAD17 checkpoint clamp loader component. (681 aa)
EXO1Exonuclease 1. (846 aa)
LOC699317Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
POLIDNA polymerase iota. (737 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
LOC106996511Histone H4. (103 aa)
RAD50Zinc-hook domain-containing protein. (1411 aa)
ATP1A1Sodium/potassium-transporting ATPase subunit alpha. (1027 aa)
LOC704341Histone H4. (103 aa)
LOC106996511-6Histone H4. (103 aa)
LOC698354Histone H4. (103 aa)
LIG4DNA ligase. (911 aa)
LOC106996511-5Histone H4. (103 aa)
LOC106996511-4Histone H4. (103 aa)
LOC697115Histone H4. (103 aa)
LOC106996511-3Histone H4. (103 aa)
HMCESAbasic site processing protein HMCES; Sensor of abasic sites in single-stranded DNA (ssDNA) required to preserve genome integrity by promoting error-free repair of abasic sites. Acts as an enzyme that recognizes and binds abasic sites in ssDNA at replication forks and chemically modifies the lesion by forming a covalent cross-link with DNA. The HMCES DNA-protein cross- link is then degraded by the proteasome. Promotes error-free repair of abasic sites by acting as a 'suicide' enzyme that is degraded, thereby protecting abasic sites from translesion synthesis (TLS) polymerases and endon [...] (360 aa)
DNA2DNA replication helicase/nuclease 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1316 aa)
LOC106996511-2Histone H4. (103 aa)
PALB2PALB2_WD40 domain-containing protein. (1205 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (832 aa)
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (149 aa)
POLD2DNA polymerase delta 2, accessory subunit. (536 aa)
APOBEC1Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (236 aa)
LOC697721Histone H4. (103 aa)
BCL11ABAF chromatin remodeling complex subunit BCL11A. (836 aa)
LOC699110Histone H4. (103 aa)
LOC695323Histone H4. (103 aa)
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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