(13 nodes) Papain family cysteine protease network (Macaca mulatta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTSB	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (453 aa)
	CTSW	Cathepsin W; Belongs to the peptidase C1 family. (375 aa)
	CTSH	Cathepsin H; Belongs to the peptidase C1 family. (335 aa)
	CTSS	Cathepsin S; Belongs to the peptidase C1 family. (354 aa)
	TINAG	Tubulointerstitial nephritis antigen; Belongs to the peptidase C1 family. (464 aa)
	CTSZ	Cathepsin Z; Belongs to the peptidase C1 family. (303 aa)
	CTSO	Cathepsin O; Belongs to the peptidase C1 family. (321 aa)
	CTSC	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family. (463 aa)
	CTSV	Uncharacterized protein; Belongs to the peptidase C1 family. (355 aa)
	CTSL	Cathepsin L; Belongs to the peptidase C1 family. (333 aa)
	SERINC2	Serine incorporator 2; Belongs to the peptidase C1 family. (939 aa)
	ENSMMUP00000054262	Uncharacterized protein; Belongs to the peptidase C1 family. (333 aa)
	CTSF	Cathepsin F; Belongs to the peptidase C1 family. (470 aa)

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTSB	CTSC	ENSMMUP00000067393	ENSMMUP00000029147	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	0.588
CTSB	CTSF	ENSMMUP00000067393	ENSMMUP00000064533	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin F; Belongs to the peptidase C1 family.	0.787
CTSB	CTSH	ENSMMUP00000067393	ENSMMUP00000013201	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin H; Belongs to the peptidase C1 family.	0.622
CTSB	CTSL	ENSMMUP00000067393	ENSMMUP00000038922	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin L; Belongs to the peptidase C1 family.	0.965
CTSB	CTSO	ENSMMUP00000067393	ENSMMUP00000028997	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin O; Belongs to the peptidase C1 family.	0.426
CTSB	CTSS	ENSMMUP00000067393	ENSMMUP00000013979	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin S; Belongs to the peptidase C1 family.	0.699
CTSB	CTSV	ENSMMUP00000067393	ENSMMUP00000030251	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.566
CTSB	CTSZ	ENSMMUP00000067393	ENSMMUP00000020183	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Cathepsin Z; Belongs to the peptidase C1 family.	0.445
CTSB	ENSMMUP00000054262	ENSMMUP00000067393	ENSMMUP00000054262	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.526
CTSC	CTSB	ENSMMUP00000029147	ENSMMUP00000067393	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.588
CTSC	CTSF	ENSMMUP00000029147	ENSMMUP00000064533	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Cathepsin F; Belongs to the peptidase C1 family.	0.631
CTSC	CTSH	ENSMMUP00000029147	ENSMMUP00000013201	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Cathepsin H; Belongs to the peptidase C1 family.	0.527
CTSC	CTSL	ENSMMUP00000029147	ENSMMUP00000038922	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Cathepsin L; Belongs to the peptidase C1 family.	0.539
CTSC	CTSS	ENSMMUP00000029147	ENSMMUP00000013979	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Cathepsin S; Belongs to the peptidase C1 family.	0.574
CTSC	CTSV	ENSMMUP00000029147	ENSMMUP00000030251	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.477
CTSC	CTSZ	ENSMMUP00000029147	ENSMMUP00000020183	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Cathepsin Z; Belongs to the peptidase C1 family.	0.612
CTSC	ENSMMUP00000054262	ENSMMUP00000029147	ENSMMUP00000054262	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	Uncharacterized protein; Belongs to the peptidase C1 family.	0.475
CTSF	CTSB	ENSMMUP00000064533	ENSMMUP00000067393	Cathepsin F; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.787
CTSF	CTSC	ENSMMUP00000064533	ENSMMUP00000029147	Cathepsin F; Belongs to the peptidase C1 family.	Dipeptidyl peptidase 1 isoform a preproprotein; Belongs to the peptidase C1 family.	0.631
CTSF	CTSH	ENSMMUP00000064533	ENSMMUP00000013201	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin H; Belongs to the peptidase C1 family.	0.535