STRINGSTRING
CLP1 CLP1 SYMPK SYMPK CSTF3 CSTF3 FIP1L1 FIP1L1 CSTF1 CSTF1 ZC3H3 ZC3H3 ZC3H6 ZC3H6 ENSMNEP00000014519 ENSMNEP00000014519 CPSF2 CPSF2 CPSF4 CPSF4 WDR82 WDR82 RBBP6 RBBP6 PAPOLG PAPOLG SSU72 SSU72 WDR33 WDR33 PCF11 PCF11 CPSF3 CPSF3 CSTF2 CSTF2 TMEM240 TMEM240 CPSF1 CPSF1 PAPOLA PAPOLA CPSF4L CPSF4L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
SYMPKSymplekin. (1304 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
FIP1L1Fip1 domain-containing protein. (603 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
ZC3H3Zinc finger CCCH-type containing 3. (963 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1188 aa)
ENSMNEP00000014519RRM domain-containing protein. (295 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
WDR82WD repeat domain 82. (313 aa)
RBBP6RB binding protein 6, ubiquitin ligase. (1792 aa)
PAPOLGPoly(A) polymerase gamma. (707 aa)
SSU72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
WDR33WD repeat domain 33. (1336 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (625 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
TMEM240Transmembrane protein 240. (173 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1394 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
Server load: low (24%) [HD]