49 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDRT4	CMT1A duplicated region transcript 4. (191 aa)
	QSOX2	Sulfhydryl oxidase. (576 aa)
	GFY	Golgi associated olfactory signaling regulator. (518 aa)
	PCSK4	Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family. (640 aa)
	PCSK5	Proprotein convertase subtilisin/kexin type 5; Belongs to the peptidase S8 family. (1887 aa)
	BET1	Bet1 golgi vesicular membrane trafficking protein. (118 aa)
	YIF1B	Yip1 interacting factor homolog B, membrane trafficking protein. (312 aa)
	LARGE1	LARGE xylosyl- and glucuronyltransferase 1. (756 aa)
	ENTPD4	Ectonucleoside triphosphate diphosphohydrolase 4; Belongs to the GDA1/CD39 NTPase family. (620 aa)
	MMD2	Monocyte to macrophage differentiation associated 2. (235 aa)
	STEAP2	STEAP2 metalloreductase. (490 aa)
	SAMD8	Sterile alpha motif domain containing 8. (438 aa)
	IER3IP1	Immediate early response 3 interacting protein 1. (82 aa)
	SGMS1	Sphingomyelin synthase 1. (413 aa)
	FAM20C	FAM20C golgi associated secretory pathway kinase. (584 aa)
	MFNG	Beta-1,3-N-acetylglucosaminyltransferase. (321 aa)
	ZDHHC20	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (365 aa)
	LFNG	Beta-1,3-N-acetylglucosaminyltransferase. (375 aa)
	ZDHHC15	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (337 aa)
	CUX1	Homeobox protein cut-like. (1521 aa)
	SLC35A4	Uncharacterized protein. (103 aa)
	YIF1A	Yip1 interacting factor homolog A, membrane trafficking protein. (293 aa)
	CSGALNACT2	Hexosyltransferase. (542 aa)
	RFNG	Beta-1,3-N-acetylglucosaminyltransferase. (331 aa)
	MYMK	Myomaker, myoblast fusion factor. (221 aa)
	ACER3	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (233 aa)
	BET1L	Bet1 golgi vesicular membrane trafficking protein like. (111 aa)
	ATP2C1	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (983 aa)
	CHST12	Carbohydrate sulfotransferase. (509 aa)
	TVP23B	Golgi apparatus membrane protein TVP23 homolog. (205 aa)
	ERGIC1	Endoplasmic reticulum-golgi intermediate compartment 1. (290 aa)
	TVP23A	Golgi apparatus membrane protein TVP23 homolog. (213 aa)
	TBC1D20	TBC1 domain family member 20. (403 aa)
	FKTN	Fukutin. (461 aa)
	SLC35A2	Solute carrier family 35 member A2. (421 aa)
	GALNT2	Polypeptide N-acetylgalactosaminyltransferase. (571 aa)
	FURIN	Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. (794 aa)
	UNC50	Unc-50 inner nuclear membrane RNA binding protein. (278 aa)
	UBIAD1	UbiA prenyltransferase domain containing 1. (338 aa)
	POMGNT1	Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-). (748 aa)
	TPST1	Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. (370 aa)
	SYT4	Synaptotagmin 4. (425 aa)
	SLC35B1	Solute carrier family 35 member B1. (359 aa)
	MAN1C1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (630 aa)
	PCSK7	Proprotein convertase subtilisin/kexin type 7. (786 aa)
	CASD1	CAS1 domain containing 1. (797 aa)
	CSGALNACT1	Hexosyltransferase. (532 aa)
	ACER2	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (275 aa)
	B4GALNT1	Beta-1,4 N-acetylgalactosaminyltransferase. (533 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACER2	ACER3	ENSMNEP00000043447	ENSMNEP00000013108	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	0.782
ACER2	SAMD8	ENSMNEP00000043447	ENSMNEP00000007417	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Sterile alpha motif domain containing 8.	0.476
ACER2	SGMS1	ENSMNEP00000043447	ENSMNEP00000027650	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Sphingomyelin synthase 1.	0.938
ACER3	ACER2	ENSMNEP00000013108	ENSMNEP00000043447	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	0.782
ACER3	SGMS1	ENSMNEP00000013108	ENSMNEP00000027650	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Sphingomyelin synthase 1.	0.485
CHST12	CSGALNACT1	ENSMNEP00000014640	ENSMNEP00000043018	Carbohydrate sulfotransferase.	Hexosyltransferase.	0.537
CHST12	CSGALNACT2	ENSMNEP00000014640	ENSMNEP00000037921	Carbohydrate sulfotransferase.	Hexosyltransferase.	0.548
CSGALNACT1	CHST12	ENSMNEP00000043018	ENSMNEP00000014640	Hexosyltransferase.	Carbohydrate sulfotransferase.	0.537
CSGALNACT1	CSGALNACT2	ENSMNEP00000043018	ENSMNEP00000037921	Hexosyltransferase.	Hexosyltransferase.	0.925
CSGALNACT2	CHST12	ENSMNEP00000037921	ENSMNEP00000014640	Hexosyltransferase.	Carbohydrate sulfotransferase.	0.548
CSGALNACT2	CSGALNACT1	ENSMNEP00000037921	ENSMNEP00000043018	Hexosyltransferase.	Hexosyltransferase.	0.925
FAM20C	QSOX2	ENSMNEP00000028479	ENSMNEP00000044523	FAM20C golgi associated secretory pathway kinase.	Sulfhydryl oxidase.	0.507
FKTN	LARGE1	ENSMNEP00000018510	ENSMNEP00000000551	Fukutin.	LARGE xylosyl- and glucuronyltransferase 1.	0.507
FKTN	POMGNT1	ENSMNEP00000018510	ENSMNEP00000026385	Fukutin.	Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).	0.591
IER3IP1	YIF1A	ENSMNEP00000012490	ENSMNEP00000035767	Immediate early response 3 interacting protein 1.	Yip1 interacting factor homolog A, membrane trafficking protein.	0.445
IER3IP1	YIF1B	ENSMNEP00000012490	ENSMNEP00000002960	Immediate early response 3 interacting protein 1.	Yip1 interacting factor homolog B, membrane trafficking protein.	0.445
LARGE1	FKTN	ENSMNEP00000000551	ENSMNEP00000018510	LARGE xylosyl- and glucuronyltransferase 1.	Fukutin.	0.507
LARGE1	POMGNT1	ENSMNEP00000000551	ENSMNEP00000026385	LARGE xylosyl- and glucuronyltransferase 1.	Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).	0.555
LFNG	MFNG	ENSMNEP00000032535	ENSMNEP00000030574	Beta-1,3-N-acetylglucosaminyltransferase.	Beta-1,3-N-acetylglucosaminyltransferase.	0.891
LFNG	RFNG	ENSMNEP00000032535	ENSMNEP00000037992	Beta-1,3-N-acetylglucosaminyltransferase.	Beta-1,3-N-acetylglucosaminyltransferase.	0.891