12 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMNEP00000019763	Uncharacterized protein. (285 aa)
	SUN5	Sad1 and UNC84 domain containing 5. (379 aa)
	SYNE1	Spectrin repeat containing nuclear envelope protein 1. (8797 aa)
	CLMN	Calmin. (1002 aa)
	SYNE4	Spectrin repeat containing nuclear envelope family member 4. (404 aa)
	SPAG4	Sperm associated antigen 4. (440 aa)
	SUN2	Sad1 and UNC84 domain containing 2. (720 aa)
	SUN3	Sad1 and UNC84 domain containing 3. (361 aa)
	CCDC155	Coiled-coil domain containing 155. (575 aa)
	SUN1	Sad1 and UNC84 domain containing 1. (932 aa)
	SYNE3	Spectrin repeat containing nuclear envelope family member 3. (975 aa)
	ENSMNEP00000024989	KASH domain-containing protein. (3507 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC155	ENSMNEP00000019763	ENSMNEP00000033746	ENSMNEP00000019763	Coiled-coil domain containing 155.	Uncharacterized protein.	0.484
CCDC155	ENSMNEP00000024989	ENSMNEP00000033746	ENSMNEP00000024989	Coiled-coil domain containing 155.	KASH domain-containing protein.	0.484
CCDC155	SUN1	ENSMNEP00000033746	ENSMNEP00000029534	Coiled-coil domain containing 155.	Sad1 and UNC84 domain containing 1.	0.946
CCDC155	SUN2	ENSMNEP00000033746	ENSMNEP00000003471	Coiled-coil domain containing 155.	Sad1 and UNC84 domain containing 2.	0.944
CCDC155	SUN3	ENSMNEP00000033746	ENSMNEP00000002412	Coiled-coil domain containing 155.	Sad1 and UNC84 domain containing 3.	0.579
CCDC155	SYNE1	ENSMNEP00000033746	ENSMNEP00000015633	Coiled-coil domain containing 155.	Spectrin repeat containing nuclear envelope protein 1.	0.547
CCDC155	SYNE3	ENSMNEP00000033746	ENSMNEP00000029094	Coiled-coil domain containing 155.	Spectrin repeat containing nuclear envelope family member 3.	0.552
ENSMNEP00000019763	CCDC155	ENSMNEP00000019763	ENSMNEP00000033746	Uncharacterized protein.	Coiled-coil domain containing 155.	0.484
ENSMNEP00000019763	ENSMNEP00000024989	ENSMNEP00000019763	ENSMNEP00000024989	Uncharacterized protein.	KASH domain-containing protein.	0.933
ENSMNEP00000019763	SPAG4	ENSMNEP00000019763	ENSMNEP00000010819	Uncharacterized protein.	Sperm associated antigen 4.	0.522
ENSMNEP00000019763	SUN1	ENSMNEP00000019763	ENSMNEP00000029534	Uncharacterized protein.	Sad1 and UNC84 domain containing 1.	0.936
ENSMNEP00000019763	SUN2	ENSMNEP00000019763	ENSMNEP00000003471	Uncharacterized protein.	Sad1 and UNC84 domain containing 2.	0.964
ENSMNEP00000019763	SUN3	ENSMNEP00000019763	ENSMNEP00000002412	Uncharacterized protein.	Sad1 and UNC84 domain containing 3.	0.676
ENSMNEP00000019763	SUN5	ENSMNEP00000019763	ENSMNEP00000019521	Uncharacterized protein.	Sad1 and UNC84 domain containing 5.	0.504
ENSMNEP00000019763	SYNE1	ENSMNEP00000019763	ENSMNEP00000015633	Uncharacterized protein.	Spectrin repeat containing nuclear envelope protein 1.	0.703
ENSMNEP00000019763	SYNE3	ENSMNEP00000019763	ENSMNEP00000029094	Uncharacterized protein.	Spectrin repeat containing nuclear envelope family member 3.	0.446
ENSMNEP00000024989	CCDC155	ENSMNEP00000024989	ENSMNEP00000033746	KASH domain-containing protein.	Coiled-coil domain containing 155.	0.484
ENSMNEP00000024989	ENSMNEP00000019763	ENSMNEP00000024989	ENSMNEP00000019763	KASH domain-containing protein.	Uncharacterized protein.	0.933
ENSMNEP00000024989	SPAG4	ENSMNEP00000024989	ENSMNEP00000010819	KASH domain-containing protein.	Sperm associated antigen 4.	0.522
ENSMNEP00000024989	SUN1	ENSMNEP00000024989	ENSMNEP00000029534	KASH domain-containing protein.	Sad1 and UNC84 domain containing 1.	0.936