29 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRPF40A	Pre-mRNA processing factor 40 homolog A. (930 aa)
	ENSMNEP00000000224	Uncharacterized protein. (77 aa)
	DNAJC8	J domain-containing protein. (203 aa)
	ENSMNEP00000003249	J domain-containing protein. (235 aa)
	ENSMNEP00000003449	Uncharacterized protein. (253 aa)
	RBM17	RNA binding motif protein 17. (401 aa)
	ENSMNEP00000004582	J domain-containing protein. (243 aa)
	SRSF1	Uncharacterized protein. (253 aa)
	ENSMNEP00000006688	Uncharacterized protein. (155 aa)
	ENSMNEP00000008591	J domain-containing protein. (228 aa)
	DCPS	Decapping enzyme, scavenger. (339 aa)
	PSIP1	PC4 and SFRS1 interacting protein 1. (530 aa)
	ENSMNEP00000013071	Uncharacterized protein. (212 aa)
	SRSF12	Serine and arginine rich splicing factor 12. (261 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (180 aa)
	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
	PRPF40B	Pre-mRNA processing factor 40 homolog B. (892 aa)
	ENSMNEP00000023502	SEC63 domain-containing protein. (319 aa)
	RBM22	RNA binding motif protein 22. (420 aa)
	SART1	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
	PRPF4B	Pre-mRNA processing factor 4B. (1007 aa)
	SF3A1	Splicing factor 3a subunit 1. (828 aa)
	WBP11	WW domain binding protein 11. (641 aa)
	CACTIN	Cactin, spliceosome C complex subunit. (745 aa)
	PRPF39	Pre-mRNA processing factor 39. (610 aa)
	WBP4	WW domain binding protein 4. (375 aa)
	NCBP2	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
	SFSWAP	Splicing factor SWAP. (1000 aa)
	ENSMNEP00000036337	Uncharacterized protein. (168 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACTIN	ENSMNEP00000003449	ENSMNEP00000029570	ENSMNEP00000003449	Cactin, spliceosome C complex subunit.	Uncharacterized protein.	0.503
CACTIN	ENSMNEP00000023502	ENSMNEP00000029570	ENSMNEP00000023502	Cactin, spliceosome C complex subunit.	SEC63 domain-containing protein.	0.560
CACTIN	RBM22	ENSMNEP00000029570	ENSMNEP00000023822	Cactin, spliceosome C complex subunit.	RNA binding motif protein 22.	0.638
CACTIN	SNRNP200	ENSMNEP00000029570	ENSMNEP00000018125	Cactin, spliceosome C complex subunit.	Small nuclear ribonucleoprotein U5 subunit 200.	0.560
CACTIN	SRSF1	ENSMNEP00000029570	ENSMNEP00000006625	Cactin, spliceosome C complex subunit.	Uncharacterized protein.	0.503
ENSMNEP00000003449	CACTIN	ENSMNEP00000003449	ENSMNEP00000029570	Uncharacterized protein.	Cactin, spliceosome C complex subunit.	0.503
ENSMNEP00000003449	ENSMNEP00000006688	ENSMNEP00000003449	ENSMNEP00000006688	Uncharacterized protein.	Uncharacterized protein.	0.482
ENSMNEP00000003449	ENSMNEP00000023502	ENSMNEP00000003449	ENSMNEP00000023502	Uncharacterized protein.	SEC63 domain-containing protein.	0.628
ENSMNEP00000003449	ENSMNEP00000036337	ENSMNEP00000003449	ENSMNEP00000036337	Uncharacterized protein.	Uncharacterized protein.	0.571
ENSMNEP00000003449	NCBP2	ENSMNEP00000003449	ENSMNEP00000034994	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.857
ENSMNEP00000003449	PRPF39	ENSMNEP00000003449	ENSMNEP00000045202	Uncharacterized protein.	Pre-mRNA processing factor 39.	0.416
ENSMNEP00000003449	PRPF4B	ENSMNEP00000003449	ENSMNEP00000025346	Uncharacterized protein.	Pre-mRNA processing factor 4B.	0.403
ENSMNEP00000003449	PSIP1	ENSMNEP00000003449	ENSMNEP00000012710	Uncharacterized protein.	PC4 and SFRS1 interacting protein 1.	0.572
ENSMNEP00000003449	RBM22	ENSMNEP00000003449	ENSMNEP00000023822	Uncharacterized protein.	RNA binding motif protein 22.	0.658
ENSMNEP00000003449	SART1	ENSMNEP00000003449	ENSMNEP00000024038	Uncharacterized protein.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.512
ENSMNEP00000003449	SF3A1	ENSMNEP00000003449	ENSMNEP00000027649	Uncharacterized protein.	Splicing factor 3a subunit 1.	0.841
ENSMNEP00000003449	SNRNP200	ENSMNEP00000003449	ENSMNEP00000018125	Uncharacterized protein.	Small nuclear ribonucleoprotein U5 subunit 200.	0.712
ENSMNEP00000003449	SNRPC	ENSMNEP00000003449	ENSMNEP00000017482	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.496
ENSMNEP00000003449	SRSF1	ENSMNEP00000003449	ENSMNEP00000006625	Uncharacterized protein.	Uncharacterized protein.	0.866
ENSMNEP00000003449	SRSF12	ENSMNEP00000003449	ENSMNEP00000013421	Uncharacterized protein.	Serine and arginine rich splicing factor 12.	0.860