26 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GAS2L1	Growth arrest specific 2 like 1. (681 aa)
	THRAP3	Thyroid hormone receptor associated protein 3. (951 aa)
	TACC1	Transforming acidic coiled-coil containing protein 1. (805 aa)
	MED24	Uncharacterized protein. (1008 aa)
	TAF7L	TATA-box binding protein associated factor 7 like. (463 aa)
	OASL	2'-5'-oligoadenylate synthetase like. (515 aa)
	MED30	Mediator complex subunit 30. (178 aa)
	JMJD1C	Jumonji domain containing 1C. (2536 aa)
	NCOR1	Nuclear receptor corepressor 1. (2442 aa)
	NSD1	Nuclear receptor binding SET domain protein 1. (2686 aa)
	NCOA3	Nuclear receptor coactivator. (1421 aa)
	NCOA6	Nuclear receptor coactivator 6. (2066 aa)
	GTF2H1	General transcription factor IIH subunit 1. (562 aa)
	PRMT2	Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (433 aa)
	TRIP6	Thyroid hormone receptor interactor 6. (476 aa)
	MED4	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
	NR0B2	Nuclear receptor subfamily 0 group B member 2. (257 aa)
	MED12	Mediator complex subunit 12. (2178 aa)
	MED13	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2138 aa)
	ENSMNEP00000038942	Uncharacterized protein. (476 aa)
	ENSMNEP00000039504	Uncharacterized protein. (783 aa)
	BRD8	Bromodomain containing 8. (1235 aa)
	MED1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1490 aa)
	MED16	Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (841 aa)
	ARID5A	AT-rich interaction domain 5A. (594 aa)
	LOC105498354	Uncharacterized protein. (998 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMNEP00000038942	LOC105498354	ENSMNEP00000038942	ENSMNEP00000003335	Uncharacterized protein.	Uncharacterized protein.	0.563
ENSMNEP00000038942	MED1	ENSMNEP00000038942	ENSMNEP00000041651	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.560
ENSMNEP00000038942	MED16	ENSMNEP00000038942	ENSMNEP00000045341	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.643
ENSMNEP00000038942	MED24	ENSMNEP00000038942	ENSMNEP00000007988	Uncharacterized protein.	Uncharacterized protein.	0.563
ENSMNEP00000038942	MED30	ENSMNEP00000038942	ENSMNEP00000010829	Uncharacterized protein.	Mediator complex subunit 30.	0.643
ENSMNEP00000038942	MED4	ENSMNEP00000038942	ENSMNEP00000034375	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.781
ENSMNEP00000038942	TAF7L	ENSMNEP00000038942	ENSMNEP00000008070	Uncharacterized protein.	TATA-box binding protein associated factor 7 like.	0.762
GTF2H1	LOC105498354	ENSMNEP00000026959	ENSMNEP00000003335	General transcription factor IIH subunit 1.	Uncharacterized protein.	0.563
GTF2H1	MED1	ENSMNEP00000026959	ENSMNEP00000041651	General transcription factor IIH subunit 1.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.560
GTF2H1	MED16	ENSMNEP00000026959	ENSMNEP00000045341	General transcription factor IIH subunit 1.	Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.643
GTF2H1	MED24	ENSMNEP00000026959	ENSMNEP00000007988	General transcription factor IIH subunit 1.	Uncharacterized protein.	0.563
GTF2H1	MED30	ENSMNEP00000026959	ENSMNEP00000010829	General transcription factor IIH subunit 1.	Mediator complex subunit 30.	0.643
GTF2H1	MED4	ENSMNEP00000026959	ENSMNEP00000034375	General transcription factor IIH subunit 1.	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.781
GTF2H1	TAF7L	ENSMNEP00000026959	ENSMNEP00000008070	General transcription factor IIH subunit 1.	TATA-box binding protein associated factor 7 like.	0.762
LOC105498354	ENSMNEP00000038942	ENSMNEP00000003335	ENSMNEP00000038942	Uncharacterized protein.	Uncharacterized protein.	0.563
LOC105498354	GTF2H1	ENSMNEP00000003335	ENSMNEP00000026959	Uncharacterized protein.	General transcription factor IIH subunit 1.	0.563
LOC105498354	MED1	ENSMNEP00000003335	ENSMNEP00000041651	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.989
LOC105498354	MED12	ENSMNEP00000003335	ENSMNEP00000037685	Uncharacterized protein.	Mediator complex subunit 12.	0.986
LOC105498354	MED13	ENSMNEP00000003335	ENSMNEP00000038165	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.959
LOC105498354	MED16	ENSMNEP00000003335	ENSMNEP00000045341	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.967