5 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CPSF6	Cleavage and polyadenylation specific factor 6. (589 aa)
	YTHDC1	YTH domain containing 1. (731 aa)
	NUDT21	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
	VIRMA	Vir like m6A methyltransferase associated. (1813 aa)
	CPSF7	Cleavage and polyadenylation specific factor 7. (478 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF6	CPSF7	ENSMNEP00000025704	ENSMNEP00000010406	Cleavage and polyadenylation specific factor 6.	Cleavage and polyadenylation specific factor 7.	0.991
CPSF6	NUDT21	ENSMNEP00000025704	ENSMNEP00000030484	Cleavage and polyadenylation specific factor 6.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.994
CPSF6	VIRMA	ENSMNEP00000025704	ENSMNEP00000037209	Cleavage and polyadenylation specific factor 6.	Vir like m6A methyltransferase associated.	0.552
CPSF6	YTHDC1	ENSMNEP00000025704	ENSMNEP00000019953	Cleavage and polyadenylation specific factor 6.	YTH domain containing 1.	0.507
CPSF7	CPSF6	ENSMNEP00000010406	ENSMNEP00000025704	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specific factor 6.	0.991
CPSF7	NUDT21	ENSMNEP00000010406	ENSMNEP00000030484	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.992
CPSF7	VIRMA	ENSMNEP00000010406	ENSMNEP00000037209	Cleavage and polyadenylation specific factor 7.	Vir like m6A methyltransferase associated.	0.403
CPSF7	YTHDC1	ENSMNEP00000010406	ENSMNEP00000019953	Cleavage and polyadenylation specific factor 7.	YTH domain containing 1.	0.501
NUDT21	CPSF6	ENSMNEP00000030484	ENSMNEP00000025704	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specific factor 6.	0.994
NUDT21	CPSF7	ENSMNEP00000030484	ENSMNEP00000010406	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specific factor 7.	0.992
NUDT21	VIRMA	ENSMNEP00000030484	ENSMNEP00000037209	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Vir like m6A methyltransferase associated.	0.575
NUDT21	YTHDC1	ENSMNEP00000030484	ENSMNEP00000019953	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	YTH domain containing 1.	0.903
VIRMA	CPSF6	ENSMNEP00000037209	ENSMNEP00000025704	Vir like m6A methyltransferase associated.	Cleavage and polyadenylation specific factor 6.	0.552
VIRMA	CPSF7	ENSMNEP00000037209	ENSMNEP00000010406	Vir like m6A methyltransferase associated.	Cleavage and polyadenylation specific factor 7.	0.403
VIRMA	NUDT21	ENSMNEP00000037209	ENSMNEP00000030484	Vir like m6A methyltransferase associated.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.575
VIRMA	YTHDC1	ENSMNEP00000037209	ENSMNEP00000019953	Vir like m6A methyltransferase associated.	YTH domain containing 1.	0.553
YTHDC1	CPSF6	ENSMNEP00000019953	ENSMNEP00000025704	YTH domain containing 1.	Cleavage and polyadenylation specific factor 6.	0.507
YTHDC1	CPSF7	ENSMNEP00000019953	ENSMNEP00000010406	YTH domain containing 1.	Cleavage and polyadenylation specific factor 7.	0.501
YTHDC1	NUDT21	ENSMNEP00000019953	ENSMNEP00000030484	YTH domain containing 1.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.903
YTHDC1	VIRMA	ENSMNEP00000019953	ENSMNEP00000037209	YTH domain containing 1.	Vir like m6A methyltransferase associated.	0.553