29 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MMP16	Matrix metallopeptidase 16. (607 aa)
	MMP19	Matrix metallopeptidase 19. (508 aa)
	MMP20	Matrix metallopeptidase 20. (483 aa)
	MMP10	Matrix metallopeptidase 10. (475 aa)
	MMP24	Matrix metallopeptidase 24. (603 aa)
	MMP17	Matrix metallopeptidase 17. (608 aa)
	TLL1	Metalloendopeptidase. (1036 aa)
	ASTL	Metalloendopeptidase. (418 aa)
	MMP14	Matrix metallopeptidase 14. (582 aa)
	MMP11	Matrix metallopeptidase 11. (488 aa)
	MMP8	Matrix metallopeptidase 8. (467 aa)
	MMP23B	Matrix metallopeptidase 23B. (390 aa)
	MMP2	Matrix metallopeptidase 2. (660 aa)
	MMP25	Matrix metallopeptidase 25. (498 aa)
	MMP1	Matrix metallopeptidase 1. (469 aa)
	MMP9	Matrix metallopeptidase 9. (694 aa)
	MMP28	Matrix metallopeptidase 28. (520 aa)
	BMP1	Metalloendopeptidase. (986 aa)
	MMP15	Matrix metallopeptidase 15. (669 aa)
	MMP13	Matrix metallopeptidase 13. (503 aa)
	MMP12	Matrix metallopeptidase 12. (470 aa)
	MMP27	Matrix metallopeptidase 27. (513 aa)
	MMP26	Matrix metallopeptidase 26. (261 aa)
	MEP1B	Meprin A subunit. (701 aa)
	MMP3	Matrix metallopeptidase 3. (477 aa)
	MMP21	Matrix metallopeptidase 21; Belongs to the peptidase M10A family. (569 aa)
	MEP1A	Meprin A subunit. (746 aa)
	MMP7	Matrix metallopeptidase 7. (270 aa)
	TLL2	Metalloendopeptidase. (1015 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MEP1A	MEP1B	ENSMNEP00000039045	ENSMNEP00000035128	Meprin A subunit.	Meprin A subunit.	0.952
MEP1B	MEP1A	ENSMNEP00000035128	ENSMNEP00000039045	Meprin A subunit.	Meprin A subunit.	0.952
MMP1	MMP10	ENSMNEP00000021815	ENSMNEP00000006079	Matrix metallopeptidase 1.	Matrix metallopeptidase 10.	0.687
MMP1	MMP11	ENSMNEP00000021815	ENSMNEP00000014575	Matrix metallopeptidase 1.	Matrix metallopeptidase 11.	0.516
MMP1	MMP12	ENSMNEP00000021815	ENSMNEP00000034380	Matrix metallopeptidase 1.	Matrix metallopeptidase 12.	0.492
MMP1	MMP13	ENSMNEP00000021815	ENSMNEP00000028491	Matrix metallopeptidase 1.	Matrix metallopeptidase 13.	0.452
MMP1	MMP14	ENSMNEP00000021815	ENSMNEP00000012967	Matrix metallopeptidase 1.	Matrix metallopeptidase 14.	0.454
MMP1	MMP15	ENSMNEP00000021815	ENSMNEP00000027982	Matrix metallopeptidase 1.	Matrix metallopeptidase 15.	0.408
MMP1	MMP2	ENSMNEP00000021815	ENSMNEP00000015699	Matrix metallopeptidase 1.	Matrix metallopeptidase 2.	0.938
MMP1	MMP20	ENSMNEP00000021815	ENSMNEP00000004389	Matrix metallopeptidase 1.	Matrix metallopeptidase 20.	0.463
MMP1	MMP26	ENSMNEP00000021815	ENSMNEP00000035557	Matrix metallopeptidase 1.	Matrix metallopeptidase 26.	0.477
MMP1	MMP3	ENSMNEP00000021815	ENSMNEP00000041138	Matrix metallopeptidase 1.	Matrix metallopeptidase 3.	0.961
MMP1	MMP7	ENSMNEP00000021815	ENSMNEP00000034488	Matrix metallopeptidase 1.	Matrix metallopeptidase 7.	0.611
MMP1	MMP9	ENSMNEP00000021815	ENSMNEP00000022445	Matrix metallopeptidase 1.	Matrix metallopeptidase 9.	0.946
MMP10	MMP1	ENSMNEP00000006079	ENSMNEP00000021815	Matrix metallopeptidase 10.	Matrix metallopeptidase 1.	0.687
MMP10	MMP11	ENSMNEP00000006079	ENSMNEP00000014575	Matrix metallopeptidase 10.	Matrix metallopeptidase 11.	0.582
MMP10	MMP13	ENSMNEP00000006079	ENSMNEP00000028491	Matrix metallopeptidase 10.	Matrix metallopeptidase 13.	0.501
MMP10	MMP14	ENSMNEP00000006079	ENSMNEP00000012967	Matrix metallopeptidase 10.	Matrix metallopeptidase 14.	0.510
MMP10	MMP15	ENSMNEP00000006079	ENSMNEP00000027982	Matrix metallopeptidase 10.	Matrix metallopeptidase 15.	0.418
MMP10	MMP3	ENSMNEP00000006079	ENSMNEP00000041138	Matrix metallopeptidase 10.	Matrix metallopeptidase 3.	0.798