(22 nodes) TCP-1-like chaperonin intermediate domain superfamily network (Macaca nemestrina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCT2	Chaperonin containing TCP1 subunit 2. (535 aa)
	ENSMNEP00000020415	Uncharacterized protein. (382 aa)
	CCT6B	Chaperonin containing TCP1 subunit 6B. (535 aa)
	TCP1	Uncharacterized protein. (556 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (2098 aa)
	BBS10	Bardet-Biedl syndrome 10. (720 aa)
	CCT7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (639 aa)
	MKKS	McKusick-Kaufman syndrome. (570 aa)
	ENSMNEP00000030430	Uncharacterized protein. (474 aa)
	CCT5	Chaperonin containing TCP1 subunit 5. (541 aa)
	ENSMNEP00000027869	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (146 aa)
	ENSMNEP00000022061	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (588 aa)
	ENSMNEP00000020570	Uncharacterized protein. (366 aa)
	CCT6A	Uncharacterized protein. (391 aa)
	ENSMNEP00000001346	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (251 aa)
	CCT4	T-complex protein 1 subunit delta. (552 aa)
	ENSMNEP00000002554	Uncharacterized protein. (530 aa)
	CCT3	T-complex protein 1 subunit gamma. (545 aa)
	ENSMNEP00000007348	Uncharacterized protein. (318 aa)
	ENSMNEP00000014992	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (508 aa)
	CCT8	Chaperonin containing TCP1 subunit 8. (553 aa)
	ENSMNEP00000020011	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (474 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS10	CCT2	ENSMNEP00000034002	ENSMNEP00000018990	Bardet-Biedl syndrome 10.	Chaperonin containing TCP1 subunit 2.	0.980
BBS10	CCT3	ENSMNEP00000034002	ENSMNEP00000006436	Bardet-Biedl syndrome 10.	T-complex protein 1 subunit gamma.	0.950
BBS10	CCT4	ENSMNEP00000034002	ENSMNEP00000043452	Bardet-Biedl syndrome 10.	T-complex protein 1 subunit delta.	0.977
BBS10	CCT5	ENSMNEP00000034002	ENSMNEP00000029109	Bardet-Biedl syndrome 10.	Chaperonin containing TCP1 subunit 5.	0.943
BBS10	CCT6A	ENSMNEP00000034002	ENSMNEP00000000887	Bardet-Biedl syndrome 10.	Uncharacterized protein.	0.871
BBS10	CCT6B	ENSMNEP00000034002	ENSMNEP00000036987	Bardet-Biedl syndrome 10.	Chaperonin containing TCP1 subunit 6B.	0.871
BBS10	CCT7	ENSMNEP00000034002	ENSMNEP00000033952	Bardet-Biedl syndrome 10.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.943
BBS10	CCT8	ENSMNEP00000034002	ENSMNEP00000018042	Bardet-Biedl syndrome 10.	Chaperonin containing TCP1 subunit 8.	0.986
BBS10	ENSMNEP00000002554	ENSMNEP00000034002	ENSMNEP00000002554	Bardet-Biedl syndrome 10.	Uncharacterized protein.	0.871
BBS10	ENSMNEP00000007348	ENSMNEP00000034002	ENSMNEP00000007348	Bardet-Biedl syndrome 10.	Uncharacterized protein.	0.871
BBS10	ENSMNEP00000020011	ENSMNEP00000034002	ENSMNEP00000020011	Bardet-Biedl syndrome 10.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.871
BBS10	ENSMNEP00000027869	ENSMNEP00000034002	ENSMNEP00000027869	Bardet-Biedl syndrome 10.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.943
BBS10	MKKS	ENSMNEP00000034002	ENSMNEP00000032600	Bardet-Biedl syndrome 10.	McKusick-Kaufman syndrome.	0.660
CCT2	BBS10	ENSMNEP00000018990	ENSMNEP00000034002	Chaperonin containing TCP1 subunit 2.	Bardet-Biedl syndrome 10.	0.980
CCT2	CCT3	ENSMNEP00000018990	ENSMNEP00000006436	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma.	0.999
CCT2	CCT4	ENSMNEP00000018990	ENSMNEP00000043452	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta.	0.999
CCT2	CCT5	ENSMNEP00000018990	ENSMNEP00000029109	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 5.	0.996
CCT2	CCT6A	ENSMNEP00000018990	ENSMNEP00000000887	Chaperonin containing TCP1 subunit 2.	Uncharacterized protein.	0.982
CCT2	CCT6B	ENSMNEP00000018990	ENSMNEP00000036987	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 6B.	0.988
CCT2	CCT7	ENSMNEP00000018990	ENSMNEP00000033952	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.996