20 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CSGALNACT2	Hexosyltransferase. (542 aa)
	CHPF2	Hexosyltransferase. (772 aa)
	CSGALNACT1	Hexosyltransferase. (532 aa)
	BGN	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (379 aa)
	CHSY3	Hexosyltransferase. (882 aa)
	CHST3	Sulfotransferase; Belongs to the sulfotransferase 1 family. (478 aa)
	DCN	Decorin; May affect the rate of fibrils formation. (359 aa)
	CSPG5	Chondroitin sulfate proteoglycan 5. (556 aa)
	VCAN	Versican core protein; May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronan. (3398 aa)
	CSPG4	Chondroitin sulfate proteoglycan 4. (2322 aa)
	CHST15	Carbohydrate sulfotransferase 15. (561 aa)
	CHST13	Carbohydrate sulfotransferase. (341 aa)
	CHPF	Hexosyltransferase. (775 aa)
	CHST11	Carbohydrate sulfotransferase. (352 aa)
	CHST12	Carbohydrate sulfotransferase. (509 aa)
	NCAN	Neurocan. (1320 aa)
	CHST9	Carbohydrate sulfotransferase. (444 aa)
	CHST7	Sulfotransferase; Belongs to the sulfotransferase 1 family. (486 aa)
	BCAN	Brevican. (962 aa)
	CHSY1	Hexosyltransferase. (711 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCAN	BGN	ENSMNEP00000003179	ENSMNEP00000039639	Brevican.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.451
BCAN	CHPF	ENSMNEP00000003179	ENSMNEP00000018991	Brevican.	Hexosyltransferase.	0.412
BCAN	CHPF2	ENSMNEP00000003179	ENSMNEP00000044366	Brevican.	Hexosyltransferase.	0.412
BCAN	CHST11	ENSMNEP00000003179	ENSMNEP00000017621	Brevican.	Carbohydrate sulfotransferase.	0.511
BCAN	CHST12	ENSMNEP00000003179	ENSMNEP00000014640	Brevican.	Carbohydrate sulfotransferase.	0.534
BCAN	CHST7	ENSMNEP00000003179	ENSMNEP00000006593	Brevican.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.550
BCAN	CSGALNACT1	ENSMNEP00000003179	ENSMNEP00000043018	Brevican.	Hexosyltransferase.	0.594
BCAN	CSGALNACT2	ENSMNEP00000003179	ENSMNEP00000037921	Brevican.	Hexosyltransferase.	0.567
BCAN	CSPG4	ENSMNEP00000003179	ENSMNEP00000026510	Brevican.	Chondroitin sulfate proteoglycan 4.	0.607
BCAN	CSPG5	ENSMNEP00000003179	ENSMNEP00000027595	Brevican.	Chondroitin sulfate proteoglycan 5.	0.495
BCAN	DCN	ENSMNEP00000003179	ENSMNEP00000036745	Brevican.	Decorin; May affect the rate of fibrils formation.	0.621
BCAN	NCAN	ENSMNEP00000003179	ENSMNEP00000010527	Brevican.	Neurocan.	0.509
BCAN	VCAN	ENSMNEP00000003179	ENSMNEP00000026950	Brevican.	Versican core protein; May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronan.	0.611
BGN	BCAN	ENSMNEP00000039639	ENSMNEP00000003179	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Brevican.	0.451
BGN	CHPF	ENSMNEP00000039639	ENSMNEP00000018991	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Hexosyltransferase.	0.424
BGN	DCN	ENSMNEP00000039639	ENSMNEP00000036745	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Decorin; May affect the rate of fibrils formation.	0.720
BGN	VCAN	ENSMNEP00000039639	ENSMNEP00000026950	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Versican core protein; May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronan.	0.463
CHPF	BCAN	ENSMNEP00000018991	ENSMNEP00000003179	Hexosyltransferase.	Brevican.	0.412
CHPF	BGN	ENSMNEP00000018991	ENSMNEP00000039639	Hexosyltransferase.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.424
CHPF	CHPF2	ENSMNEP00000018991	ENSMNEP00000044366	Hexosyltransferase.	Hexosyltransferase.	0.817