22 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMA1	Proteasome subunit alpha type. (269 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	ENSMNEP00000004092	Proteasome subunit alpha type. (231 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	ENSMNEP00000007101	Uncharacterized protein. (191 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	ENSMNEP00000010989	Proteasome endopeptidase complex. (241 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMB6	Proteasome subunit beta. (285 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMA4	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (307 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	ENSMNEP00000036101	Uncharacterized protein. (167 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMB8	Proteasome subunit beta. (276 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMNEP00000004092	ENSMNEP00000007101	ENSMNEP00000004092	ENSMNEP00000007101	Proteasome subunit alpha type.	Uncharacterized protein.	0.984
ENSMNEP00000004092	ENSMNEP00000036101	ENSMNEP00000004092	ENSMNEP00000036101	Proteasome subunit alpha type.	Uncharacterized protein.	0.990
ENSMNEP00000004092	PSMA1	ENSMNEP00000004092	ENSMNEP00000001138	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.992
ENSMNEP00000004092	PSMA2	ENSMNEP00000004092	ENSMNEP00000040416	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.994
ENSMNEP00000004092	PSMA3	ENSMNEP00000004092	ENSMNEP00000023078	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.990
ENSMNEP00000004092	PSMA4	ENSMNEP00000004092	ENSMNEP00000026048	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.994
ENSMNEP00000004092	PSMA5	ENSMNEP00000004092	ENSMNEP00000020680	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.993
ENSMNEP00000004092	PSMA7	ENSMNEP00000004092	ENSMNEP00000006872	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.982
ENSMNEP00000004092	PSMA8	ENSMNEP00000004092	ENSMNEP00000010614	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.973
ENSMNEP00000004092	PSMB1	ENSMNEP00000004092	ENSMNEP00000021212	Proteasome subunit alpha type.	Proteasome subunit beta.	0.992
ENSMNEP00000004092	PSMB10	ENSMNEP00000004092	ENSMNEP00000007653	Proteasome subunit alpha type.	Proteasome subunit beta.	0.986
ENSMNEP00000004092	PSMB2	ENSMNEP00000004092	ENSMNEP00000039451	Proteasome subunit alpha type.	Proteasome subunit beta.	0.993
ENSMNEP00000004092	PSMB3	ENSMNEP00000004092	ENSMNEP00000028175	Proteasome subunit alpha type.	Proteasome subunit beta.	0.988
ENSMNEP00000004092	PSMB4	ENSMNEP00000004092	ENSMNEP00000007855	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.993
ENSMNEP00000004092	PSMB5	ENSMNEP00000004092	ENSMNEP00000043016	Proteasome subunit alpha type.	Proteasome subunit beta.	0.980
ENSMNEP00000004092	PSMB6	ENSMNEP00000004092	ENSMNEP00000022750	Proteasome subunit alpha type.	Proteasome subunit beta.	0.989
ENSMNEP00000004092	PSMB7	ENSMNEP00000004092	ENSMNEP00000021546	Proteasome subunit alpha type.	Proteasome subunit beta.	0.991
ENSMNEP00000004092	PSMB8	ENSMNEP00000004092	ENSMNEP00000044776	Proteasome subunit alpha type.	Proteasome subunit beta.	0.978
ENSMNEP00000004092	PSMB9	ENSMNEP00000004092	ENSMNEP00000030552	Proteasome subunit alpha type.	Proteasome subunit beta.	0.983
ENSMNEP00000007101	ENSMNEP00000004092	ENSMNEP00000007101	ENSMNEP00000004092	Uncharacterized protein.	Proteasome subunit alpha type.	0.984