40 items (Macaca nemestrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZMAT5	Zinc finger matrin-type 5. (170 aa)
	ZFP36L2	ZFP36 ring finger protein like 2. (493 aa)
	RBM22	RNA binding motif protein 22. (420 aa)
	ZC3H7A	Zinc finger CCCH-type containing 7A. (971 aa)
	UNKL	Uncharacterized protein. (732 aa)
	UNK	Unk zinc finger. (810 aa)
	ZC3H7B	Zinc finger CCCH-type containing 7B. (985 aa)
	HELZ	Helicase with zinc finger. (1943 aa)
	TRMT1	tRNA methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (714 aa)
	U2AF1L4	Uncharacterized protein. (211 aa)
	MBNL3	Muscleblind like splicing regulator 3. (369 aa)
	LOC105499966	Uncharacterized protein. (489 aa)
	ZC3H4	Zinc finger CCCH-type containing 4. (1304 aa)
	ZFP36	ZFP36 ring finger protein. (332 aa)
	DHX57	DExH-box helicase 57. (1387 aa)
	MKRN1	Makorin ring finger protein 1. (479 aa)
	PPP1R10	Protein phosphatase 1 regulatory subunit 10. (940 aa)
	RBM26	RNA binding motif protein 26. (1007 aa)
	ZRSR2	Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (480 aa)
	ZC3H13	Zinc finger CCCH-type containing 13. (1668 aa)
	MBNL2	Muscleblind like splicing regulator 2. (391 aa)
	CPSF4L	Cleavage and polyadenylation specific factor 4 like. (179 aa)
	ZC3H14	Zinc finger CCCH-type containing 14. (736 aa)
	ZGPAT	Zinc finger CCCH-type and G-patch domain containing. (510 aa)
	RNF113A	Ring finger protein 113A. (344 aa)
	ZC3H10	Zinc finger CCCH-type containing 10. (434 aa)
	PARP12	Poly(ADP-ribose) polymerase family member 12. (701 aa)
	ZC3H3	Zinc finger CCCH-type containing 3. (963 aa)
	PRR3	Proline rich 3. (246 aa)
	U2AF1	Uncharacterized protein. (246 aa)
	MKRN2	Makorin ring finger protein 2. (416 aa)
	ZC3H6	Zinc finger CCCH-type containing 6. (1188 aa)
	ENSMNEP00000014114	Uncharacterized protein. (799 aa)
	MBNL1	Muscleblind like splicing regulator 1. (399 aa)
	ZC3H15	Zinc finger CCCH-type containing 15. (432 aa)
	RC3H2	Ring finger and CCCH-type domains 2. (1191 aa)
	CPSF4	Cleavage and polyadenylation specific factor 4. (269 aa)
	ZFP36L1	ZFP36 ring finger protein like 1. (338 aa)
	PAN3	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (936 aa)
	ZC3H8	Zinc finger CCCH-type containing 8. (295 aa)

Your Current Organism:

Macaca nemestrina

NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF4	CPSF4L	ENSMNEP00000016590	ENSMNEP00000045883	Cleavage and polyadenylation specific factor 4.	Cleavage and polyadenylation specific factor 4 like.	0.890
CPSF4	ZC3H3	ENSMNEP00000016590	ENSMNEP00000010040	Cleavage and polyadenylation specific factor 4.	Zinc finger CCCH-type containing 3.	0.407
CPSF4L	CPSF4	ENSMNEP00000045883	ENSMNEP00000016590	Cleavage and polyadenylation specific factor 4 like.	Cleavage and polyadenylation specific factor 4.	0.890
DHX57	RNF113A	ENSMNEP00000033470	ENSMNEP00000004234	DExH-box helicase 57.	Ring finger protein 113A.	0.573
DHX57	ZC3H13	ENSMNEP00000033470	ENSMNEP00000043347	DExH-box helicase 57.	Zinc finger CCCH-type containing 13.	0.512
ENSMNEP00000014114	ZC3H13	ENSMNEP00000014114	ENSMNEP00000043347	Uncharacterized protein.	Zinc finger CCCH-type containing 13.	0.700
HELZ	RC3H2	ENSMNEP00000027451	ENSMNEP00000015224	Helicase with zinc finger.	Ring finger and CCCH-type domains 2.	0.591
RBM22	RNF113A	ENSMNEP00000023822	ENSMNEP00000004234	RNA binding motif protein 22.	Ring finger protein 113A.	0.902
RC3H2	HELZ	ENSMNEP00000015224	ENSMNEP00000027451	Ring finger and CCCH-type domains 2.	Helicase with zinc finger.	0.591
RNF113A	DHX57	ENSMNEP00000004234	ENSMNEP00000033470	Ring finger protein 113A.	DExH-box helicase 57.	0.573
RNF113A	RBM22	ENSMNEP00000004234	ENSMNEP00000023822	Ring finger protein 113A.	RNA binding motif protein 22.	0.902
RNF113A	ZC3H13	ENSMNEP00000004234	ENSMNEP00000043347	Ring finger protein 113A.	Zinc finger CCCH-type containing 13.	0.621
U2AF1	U2AF1L4	ENSMNEP00000012030	ENSMNEP00000029073	Uncharacterized protein.	Uncharacterized protein.	0.698
U2AF1	ZRSR2	ENSMNEP00000012030	ENSMNEP00000040883	Uncharacterized protein.	Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.	0.501
U2AF1L4	U2AF1	ENSMNEP00000029073	ENSMNEP00000012030	Uncharacterized protein.	Uncharacterized protein.	0.698
U2AF1L4	ZRSR2	ENSMNEP00000029073	ENSMNEP00000040883	Uncharacterized protein.	Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.	0.447
ZC3H13	DHX57	ENSMNEP00000043347	ENSMNEP00000033470	Zinc finger CCCH-type containing 13.	DExH-box helicase 57.	0.512
ZC3H13	ENSMNEP00000014114	ENSMNEP00000043347	ENSMNEP00000014114	Zinc finger CCCH-type containing 13.	Uncharacterized protein.	0.700
ZC3H13	RNF113A	ENSMNEP00000043347	ENSMNEP00000004234	Zinc finger CCCH-type containing 13.	Ring finger protein 113A.	0.621
ZC3H3	CPSF4	ENSMNEP00000010040	ENSMNEP00000016590	Zinc finger CCCH-type containing 3.	Cleavage and polyadenylation specific factor 4.	0.407