STRINGSTRING
DDX25 DDX25 ZC3H8 ZC3H8 ENSMNEP00000021240 ENSMNEP00000021240 PPP2R1A PPP2R1A PPP2R5D PPP2R5D ENSMNEP00000013289 ENSMNEP00000013289 RBMX2 RBMX2 C3orf67 C3orf67 TMEM223 TMEM223 INTS11 INTS11 MSL1 MSL1 TARDBP TARDBP LOC105472065 LOC105472065 WDR77 WDR77 SMG1 SMG1 TUT1 TUT1 CPSF7 CPSF7 ENSMNEP00000010403 ENSMNEP00000010403 PPP4R1 PPP4R1 ZC3H3 ZC3H3 ENSMNEP00000010011 ENSMNEP00000010011 MAGOHB MAGOHB PARP12 PARP12 MKRN3 MKRN3 CSTF1 CSTF1 PPP4R4 PPP4R4 ENSMNEP00000007398 ENSMNEP00000007398 FUS FUS NXT1 NXT1 FIP1L1 FIP1L1 ENSMNEP00000005848 ENSMNEP00000005848 ENSMNEP00000005663 ENSMNEP00000005663 DCLRE1A DCLRE1A PNN PNN LOC105481505 LOC105481505 PPP2R3C PPP2R3C PPP2R2A PPP2R2A CSTF3 CSTF3 SYMPK SYMPK ENSMNEP00000002293 ENSMNEP00000002293 NXT2 NXT2 PABPC1 PABPC1 UPF2 UPF2 ENSMNEP00000001787 ENSMNEP00000001787 ENSMNEP00000000249 ENSMNEP00000000249 CLP1 CLP1 UPF1 UPF1 PPP2R3A PPP2R3A PPP1R42 PPP1R42 SERAC1 SERAC1 YTHDC1 YTHDC1 RBBP6 RBBP6 ETF1 ETF1 WDR82 WDR82 TWF1 TWF1 CIRBP CIRBP GSPT1 GSPT1 BOLL BOLL COPS5 COPS5 PPP1CB PPP1CB SAP18 SAP18 RNPS1 RNPS1 NXF3 NXF3 CPSF4 CPSF4 PABPC1L PABPC1L MAGOH MAGOH PPP2R2C PPP2R2C CPSF2 CPSF2 PPP2R2B PPP2R2B ENSMNEP00000014519 ENSMNEP00000014519 ST13 ST13 ZGRF1 ZGRF1 ZC3H6 ZC3H6 MKRN2 MKRN2 ENSMNEP00000013845 ENSMNEP00000013845 PPP2R2D PPP2R2D DDX39B DDX39B ENSMNEP00000035495 ENSMNEP00000035495 RNGTT RNGTT LOC105491543 LOC105491543 NCBP2 NCBP2 ENSMNEP00000034856 ENSMNEP00000034856 RBM8A RBM8A TWF2 TWF2 ENSMNEP00000034267 ENSMNEP00000034267 MKRN1 MKRN1 DAZAP1 DAZAP1 MSI1 MSI1 ENSMNEP00000033302 ENSMNEP00000033302 UPF3B UPF3B SRRM1 SRRM1 CPSF3 CPSF3 ZC3H4 ZC3H4 RNMT RNMT FNBP4 FNBP4 EIF4A3 EIF4A3 LOC105499966 LOC105499966 RNF141 RNF141 PPP1CC PPP1CC WDR90 WDR90 PCF11 PCF11 ENSMNEP00000030648 ENSMNEP00000030648 NUDT21 NUDT21 NEDD1 NEDD1 WDR33 WDR33 ENSMNEP00000029986 ENSMNEP00000029986 ENSMNEP00000029945 ENSMNEP00000029945 DCLRE1B DCLRE1B PPP2R5B PPP2R5B PPP2R5E PPP2R5E LOC105471149 LOC105471149 PABPC5 PABPC5 PIH1D3 PIH1D3 POLDIP3 POLDIP3 CFAP20 CFAP20 NCBP1 NCBP1 PPP1CA PPP1CA TMEM258 TMEM258 RBM3 RBM3 CSTF2 CSTF2 SSU72 SSU72 PPP2CB PPP2CB UPF3A UPF3A CPSF6 CPSF6 ENSMNEP00000025663 ENSMNEP00000025663 PPP2R1B PPP2R1B ACIN1 ACIN1 PAPOLG PAPOLG ENSMNEP00000024434 ENSMNEP00000024434 GLE1 GLE1 PELO PELO ENSMNEP00000023312 ENSMNEP00000023312 INTS9 INTS9 JAZF1 JAZF1 PPP2R5C PPP2R5C SMG7 SMG7 NXF1 NXF1 PYM1 PYM1 EIF2A EIF2A MORN1 MORN1 CPSF4L CPSF4L MSI2 MSI2 BCL2L2-PABPN1 BCL2L2-PABPN1 PABPN1L PABPN1L SMG6 SMG6 SMG5 SMG5 DDX39A DDX39A LOC105499802 LOC105499802 PPP2R5A PPP2R5A HBS1L HBS1L PAPOLA PAPOLA LOC105470589 LOC105470589 ENSMNEP00000042116 ENSMNEP00000042116 DDX19B DDX19B ALYREF ALYREF DUSP11 DUSP11 CPSF1 CPSF1 ENSMNEP00000041539 ENSMNEP00000041539 PPP2CA PPP2CA TMEM240 TMEM240 PABPC4 PABPC4 CZIB CZIB PABPC3 PABPC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDX25DEAD-box helicase 25. (483 aa)
ZC3H8Zinc finger CCCH-type containing 8. (295 aa)
ENSMNEP00000021240Uncharacterized protein. (514 aa)
PPP2R1AProtein phosphatase 2 scaffold subunit Aalpha. (589 aa)
PPP2R5DSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (602 aa)
ENSMNEP00000013289Uncharacterized protein. (136 aa)
RBMX2RNA binding motif protein X-linked 2. (322 aa)
C3orf67Chromosome 3 open reading frame 67. (814 aa)
TMEM223Transmembrane protein 223. (202 aa)
INTS11Integrator complex subunit 11. (679 aa)
MSL1MSL complex subunit 1. (612 aa)
TARDBPTAR DNA binding protein. (414 aa)
LOC105472065Uncharacterized protein. (229 aa)
WDR77WD repeat domain 77. (342 aa)
SMG1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3660 aa)
TUT1RRM domain-containing protein. (908 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (478 aa)
ENSMNEP00000010403Uncharacterized protein. (99 aa)
PPP4R1Protein phosphatase 4 regulatory subunit 1. (933 aa)
ZC3H3Zinc finger CCCH-type containing 3. (963 aa)
ENSMNEP00000010011Tap-RNA_bind domain-containing protein. (397 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
PARP12Poly(ADP-ribose) polymerase family member 12. (701 aa)
MKRN3Uncharacterized protein. (182 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
PPP4R4Protein phosphatase 4 regulatory subunit 4. (872 aa)
ENSMNEP00000007398RRM domain-containing protein. (259 aa)
FUSFUS RNA binding protein. (535 aa)
NXT1Nuclear transport factor 2 like export factor 1. (140 aa)
FIP1L1Fip1 domain-containing protein. (603 aa)
ENSMNEP00000005848RRM domain-containing protein. (377 aa)
ENSMNEP00000005663TPR_REGION domain-containing protein. (334 aa)
DCLRE1ADNA cross-link repair 1A. (1038 aa)
PNNPinin, desmosome associated protein. (717 aa)
LOC105481505RRM domain-containing protein. (285 aa)
PPP2R3CProtein phosphatase 2 regulatory subunit B''gamma. (453 aa)
PPP2R2ASerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (457 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
SYMPKSymplekin. (1304 aa)
ENSMNEP00000002293Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (578 aa)
NXT2Nuclear transport factor 2 like export factor 2. (197 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (578 aa)
UPF2Uncharacterized protein. (1025 aa)
ENSMNEP00000001787Uncharacterized protein. (530 aa)
ENSMNEP00000000249RRM domain-containing protein. (157 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
UPF1UPF1 RNA helicase and ATPase. (1129 aa)
PPP2R3AProtein phosphatase 2 regulatory subunit B''alpha. (1127 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42. (357 aa)
SERAC1Serine active site containing 1. (654 aa)
YTHDC1YTH domain containing 1. (731 aa)
RBBP6RB binding protein 6, ubiquitin ligase. (1792 aa)
ETF1eRF1_1 domain-containing protein. (423 aa)
WDR82WD repeat domain 82. (313 aa)
TWF1Twinfilin actin binding protein 1. (384 aa)
CIRBPCold inducible RNA binding protein. (284 aa)
GSPT1G1 to S phase transition 1. (639 aa)
BOLLBoule homolog, RNA binding protein. (311 aa)
COPS5COP9 signalosome subunit 5. (334 aa)
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
SAP18Sin3A associated protein 18. (172 aa)
RNPS1RRM domain-containing protein. (295 aa)
NXF3Nuclear RNA export factor 3. (544 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (616 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
PPP2R2CSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (447 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
PPP2R2BSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (509 aa)
ENSMNEP00000014519RRM domain-containing protein. (295 aa)
ST13ST13 Hsp70 interacting protein. (354 aa)
ZGRF1Zinc finger GRF-type containing 1. (2109 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1188 aa)
MKRN2Makorin ring finger protein 2. (416 aa)
ENSMNEP00000013845Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (436 aa)
PPP2R2DSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (453 aa)
DDX39BDExD-box helicase 39B. (428 aa)
ENSMNEP00000035495Smg4_UPF3 domain-containing protein. (194 aa)
RNGTTPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (597 aa)
LOC105491543Uncharacterized protein. (419 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
ENSMNEP00000034856eRF1_1 domain-containing protein. (379 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
TWF2Twinfilin actin binding protein 2. (348 aa)
ENSMNEP00000034267Uncharacterized protein. (139 aa)
MKRN1Makorin ring finger protein 1. (479 aa)
DAZAP1DAZ associated protein 1. (407 aa)
MSI1Musashi RNA binding protein 1. (362 aa)
ENSMNEP00000033302Uncharacterized protein. (317 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
SRRM1Serine and arginine repetitive matrix 1. (917 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (625 aa)
ZC3H4Zinc finger CCCH-type containing 4. (1304 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (479 aa)
FNBP4Formin binding protein 4. (1017 aa)
EIF4A3Uncharacterized protein; Belongs to the DEAD box helicase family. (428 aa)
LOC105499966Uncharacterized protein. (489 aa)
RNF141Ring finger protein 141. (230 aa)
PPP1CCSerine/threonine-protein phosphatase. (293 aa)
WDR90WD repeat domain 90. (1899 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
ENSMNEP00000030648EF-hand domain-containing protein. (559 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
NEDD1NEDD1 gamma-tubulin ring complex targeting factor. (660 aa)
WDR33WD repeat domain 33. (1336 aa)
ENSMNEP00000029986Uncharacterized protein; Belongs to the DEAD box helicase family. (387 aa)
ENSMNEP00000029945Uncharacterized protein. (139 aa)
DCLRE1BDNA cross-link repair 1B. (532 aa)
PPP2R5BSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (596 aa)
PPP2R5ESerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (467 aa)
LOC105471149Uncharacterized protein. (200 aa)
PABPC5Poly(A) binding protein cytoplasmic 5. (382 aa)
PIH1D3PIH1 domain containing 3. (209 aa)
POLDIP3DNA polymerase delta interacting protein 3. (436 aa)
CFAP20Cilia and flagella associated protein 20. (193 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
PPP1CASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
TMEM258Transmembrane protein 258. (79 aa)
RBM3RNA binding motif protein 3. (157 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
SSU72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
PPP2CBSerine/threonine-protein phosphatase. (309 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (472 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (589 aa)
ENSMNEP00000025663STI1 domain-containing protein. (353 aa)
PPP2R1BProtein phosphatase 2 scaffold subunit Abeta. (667 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1336 aa)
PAPOLGPoly(A) polymerase gamma. (707 aa)
ENSMNEP00000024434RRM domain-containing protein. (253 aa)
GLE1GLE1 RNA export mediator. (698 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
ENSMNEP00000023312Upf2 domain-containing protein. (202 aa)
INTS9Integrator complex subunit 9. (693 aa)
JAZF1JAZF zinc finger 1. (243 aa)
PPP2R5CSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (533 aa)
SMG7SMG7 nonsense mediated mRNA decay factor. (1145 aa)
NXF1Nuclear RNA export factor 1. (619 aa)
PYM1PYM homolog 1, exon junction complex associated factor. (204 aa)
EIF2AEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (576 aa)
MORN1MORN repeat containing 1. (439 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
MSI2Musashi RNA binding protein 2. (328 aa)
BCL2L2-PABPN1BCL2L2-PABPN1 readthrough. (333 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (275 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1387 aa)
SMG5SMG5 nonsense mediated mRNA decay factor. (1016 aa)
DDX39ADExD-box helicase 39A. (488 aa)
LOC105499802Tap-RNA_bind domain-containing protein. (361 aa)
PPP2R5ASerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (486 aa)
HBS1LHBS1 like translational GTPase. (684 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
LOC105470589WRNPLPNID domain-containing protein. (954 aa)
ENSMNEP00000042116RRM domain-containing protein. (272 aa)
DDX19BDEAD-box helicase 19B. (477 aa)
ALYREFAly/REF export factor. (290 aa)
DUSP11Dual specificity phosphatase 11. (378 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1394 aa)
ENSMNEP00000041539STI1 domain-containing protein. (343 aa)
PPP2CASerine/threonine-protein phosphatase. (309 aa)
TMEM240Transmembrane protein 240. (173 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
CZIBCXXC motif containing zinc binding protein. (160 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (631 aa)
Your Current Organism:
Macaca nemestrina
NCBI taxonomy Id: 9545
Other names: M. nemestrina, pig-tailed macaque, pigtail macaque, pigtail monkey
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