STRINGSTRING
LSM3 LSM3 DDX39B DDX39B LARP7 LARP7 SNRPC-2 SNRPC-2 CELF3 CELF3 SNRPA SNRPA LSM7 LSM7 CCNT1 CCNT1 RBM22 RBM22 RO60 RO60 SART3 SART3 CCNT2 CCNT2 SNRPB2 SNRPB2 TOE1 TOE1 SNRNP35 SNRNP35 RBM41 RBM41 GEMIN5 GEMIN5 SNRPA1 SNRPA1 LSM2 LSM2 MEPCE MEPCE HNRNPU HNRNPU LSM10 LSM10 HEXIM1 HEXIM1 PRPF31 PRPF31 TUT1 TUT1 SNRNP70 SNRNP70 PRPF4 PRPF4 CDK9 CDK9 PRPF8 PRPF8 COIL COIL DDX21 DDX21 HEXIM2 HEXIM2 SNRPD3 SNRPD3 METTL16 METTL16 SNU13 SNU13 RBM7 RBM7 ENSPANP00000032892 ENSPANP00000032892 LSM4 LSM4 SNRPC SNRPC ENSPANP00000040434 ENSPANP00000040434 LSM11 LSM11 LRMDA LRMDA ISG20 ISG20 LSM3-2 LSM3-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
DDX39BDExD-box helicase 39B. (428 aa)
LARP7La ribonucleoprotein domain family member 7. (589 aa)
SNRPC-2U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (170 aa)
CELF3Uncharacterized protein. (465 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (728 aa)
RBM22RNA binding motif protein 22. (420 aa)
RO60Ro60, Y RNA binding protein. (538 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (981 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
TOE1Target of EGR1, exonuclease. (519 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (251 aa)
RBM41RNA binding motif protein 41. (413 aa)
GEMIN5Gem nuclear organelle associated protein 5. (1484 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
MEPCEMethylphosphate capping enzyme. (689 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
HEXIM1HEXIM P-TEFb complex subunit 1. (359 aa)
PRPF31Nop domain-containing protein. (508 aa)
TUT1RRM domain-containing protein. (829 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (437 aa)
PRPF4Pre-mRNA processing factor 4. (543 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
PRPF8Pre-mRNA processing factor 8. (2339 aa)
COILCoilin. (576 aa)
DDX21DExD-box helicase 21. (783 aa)
HEXIM2HEXIM P-TEFb complex subunit 2. (286 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
METTL16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (561 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
RBM7RRM domain-containing protein. (267 aa)
ENSPANP00000032892Helicase ATP-binding domain-containing protein. (684 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (231 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (179 aa)
ENSPANP00000040434RRM domain-containing protein. (180 aa)
LSM11LSM11, U7 small nuclear RNA associated. (366 aa)
LRMDALeucine rich melanocyte differentiation associated. (226 aa)
ISG20Interferon stimulated exonuclease gene 20. (181 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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