STRINGSTRING
SNRPD1 SNRPD1 LSM3-2 LSM3-2 ENSPANP00000043082 ENSPANP00000043082 ENSPANP00000042764 ENSPANP00000042764 ENSPANP00000041983 ENSPANP00000041983 ZMAT2 ZMAT2 SF3A3 SF3A3 ENSPANP00000040434 ENSPANP00000040434 LSM8 LSM8 LSM5-3 LSM5-3 LSM5 LSM5 ENSPANP00000035299 ENSPANP00000035299 ENSPANP00000034859 ENSPANP00000034859 LSM4 LSM4 SNRPG SNRPG PRPF3 PRPF3 ENSPANP00000030795 ENSPANP00000030795 ENSPANP00000030279 ENSPANP00000030279 ENSPANP00000027975 ENSPANP00000027975 SNU13 SNU13 ENSPANP00000027765 ENSPANP00000027765 SART1 SART1 SNRPB SNRPB SF3B5 SF3B5 SNRPE SNRPE ENSPANP00000024006 ENSPANP00000024006 LSM5-2 LSM5-2 SNRPD3 SNRPD3 EFTUD2 EFTUD2 PRPF8 PRPF8 SMU1 SMU1 PRPF4 PRPF4 SNRPB2 SNRPB2 LSM6 LSM6 SF3B3 SF3B3 IK IK MFAP1 MFAP1 SNRPA1 SNRPA1 PRPF6 PRPF6 DHX16 DHX16 PHF5A PHF5A SF3A1 SF3A1 LSM2 LSM2 BUD13 BUD13 RBMX2 RBMX2 SNRNP200 SNRNP200 LSM8-2 LSM8-2 SF3B2 SF3B2 SF3A2 SF3A2 PRPF31 PRPF31 ENSPANP00000006774 ENSPANP00000006774 TXNL4A TXNL4A SNIP1 SNIP1 SF3B1 SF3B1 LSM7 LSM7 SNRPD2 SNRPD2 SNRPD2-2 SNRPD2-2 WBP4 WBP4 LSM3 LSM3 RNF113A RNF113A ENSPANP00000002678 ENSPANP00000002678 PRPF38A PRPF38A SF3B4 SF3B4 CWC27 CWC27 CWC22 CWC22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
ENSPANP00000043082Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
ENSPANP00000042764Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
ENSPANP00000041983Uncharacterized protein. (422 aa)
ZMAT2Zinc finger matrin-type 2. (195 aa)
SF3A3Splicing factor 3a subunit 3. (504 aa)
ENSPANP00000040434RRM domain-containing protein. (180 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
LSM5-3U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
ENSPANP00000035299Sm domain-containing protein. (127 aa)
ENSPANP00000034859Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (91 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (231 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
PRPF3Pre-mRNA processing factor 3. (683 aa)
ENSPANP00000030795Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
ENSPANP00000030279Matrin-type domain-containing protein. (468 aa)
ENSPANP00000027975Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (75 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
ENSPANP00000027765Uncharacterized protein. (54 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (261 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSPANP00000024006Sm domain-containing protein. (65 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (82 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
PRPF8Pre-mRNA processing factor 8. (2339 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
PRPF4Pre-mRNA processing factor 4. (543 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
IKIK cytokine. (534 aa)
MFAP1Microfibrillar-associated protein 1 (Predicted). (439 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
PRPF6Pre-mRNA processing factor 6. (941 aa)
DHX16DEAH-box helicase 16. (556 aa)
PHF5APHD finger protein 5A. (110 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
BUD13Uncharacterized protein. (618 aa)
RBMX2RNA binding motif protein X-linked 2. (327 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
PRPF31Nop domain-containing protein. (508 aa)
ENSPANP00000006774Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (81 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SNIP1Smad nuclear interacting protein 1. (402 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
WBP4WW domain binding protein 4. (375 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
RNF113ARing finger protein 113A. (344 aa)
ENSPANP00000002678RRM domain-containing protein. (317 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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