STRINGSTRING
C19orf54 C19orf54 MMP10 MMP10 SART3 SART3 CD2BP2 CD2BP2 LSM3-2 LSM3-2 RBM42 RBM42 SNRPD3 SNRPD3 PDE6C PDE6C PRPF18 PRPF18 PRPF8 PRPF8 PRPF4 PRPF4 USP39 USP39 SNRPB2 SNRPB2 AAR2 AAR2 LSM6 LSM6 SF3B3 SF3B3 PHF5A PHF5A SF3A1 SF3A1 ENSPANP00000006774 ENSPANP00000006774 TXNL4A TXNL4A SNRNP40 SNRNP40 SF3B6 SF3B6 SNRPA SNRPA SNRPD2-2 SNRPD2-2 SNRPD2 SNRPD2 TRMT13 TRMT13 LSM7 LSM7 SF3B1 SF3B1 SNIP1 SNIP1 PRPF3 PRPF3 ENSPANP00000030795 ENSPANP00000030795 ENSPANP00000030279 ENSPANP00000030279 ENSPANP00000028052 ENSPANP00000028052 ENSPANP00000027975 ENSPANP00000027975 ENSPANP00000027765 ENSPANP00000027765 SART1 SART1 SNRPB SNRPB SF3B5 SF3B5 SNRPE SNRPE ENSPANP00000024006 ENSPANP00000024006 LSM5-2 LSM5-2 LSM3 LSM3 TMIGD2 TMIGD2 PPIH PPIH SNRPD1 SNRPD1 ENSPANP00000002678 ENSPANP00000002678 CCDC84 CCDC84 SF3B2 SF3B2 ENSPANP00000043082 ENSPANP00000043082 ENSPANP00000042764 ENSPANP00000042764 ENSPANP00000041983 ENSPANP00000041983 ZMAT2 ZMAT2 SF3A3 SF3A3 ENSPANP00000040434 ENSPANP00000040434 LSM8 LSM8 SNRPN SNRPN LSM5-3 LSM5-3 LSM5 LSM5 ENSPANP00000035299 ENSPANP00000035299 C3orf49 C3orf49 ENSPANP00000034859 ENSPANP00000034859 LSM4 LSM4 SNRPG SNRPG ENSPANP00000033318 ENSPANP00000033318 SF3A2 SF3A2 PRPF31 PRPF31 HTATSF1 HTATSF1 ZNF608 ZNF608 SNRNP200 SNRNP200 LSM8-2 LSM8-2 RBMX2 RBMX2 LSM2 LSM2 DDX39B DDX39B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C19orf54Chromosome 19 open reading frame 54. (351 aa)
MMP10Matrix metallopeptidase 10. (476 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (981 aa)
CD2BP2CD2 cytoplasmic tail binding protein 2. (341 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
RBM42RNA binding motif protein 42. (472 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PDE6CPhosphodiesterase. (858 aa)
PRPF18Pre-mRNA processing factor 18. (351 aa)
PRPF8Pre-mRNA processing factor 8. (2339 aa)
PRPF4Pre-mRNA processing factor 4. (543 aa)
USP39Ubiquitin specific peptidase 39. (565 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
AAR2AAR2 splicing factor. (392 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
PHF5APHD finger protein 5A. (110 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
ENSPANP00000006774Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (81 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SNRNP40Small nuclear ribonucleoprotein U5 subunit 40. (389 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
TRMT13tRNA methyltransferase 13 homolog. (481 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
SNIP1Smad nuclear interacting protein 1. (402 aa)
PRPF3Pre-mRNA processing factor 3. (683 aa)
ENSPANP00000030795Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
ENSPANP00000030279Matrin-type domain-containing protein. (468 aa)
ENSPANP00000028052Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (159 aa)
ENSPANP00000027975Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (75 aa)
ENSPANP00000027765Uncharacterized protein. (54 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (261 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSPANP00000024006Sm domain-containing protein. (65 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (82 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
TMIGD2Transmembrane and immunoglobulin domain containing 2. (275 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
ENSPANP00000002678RRM domain-containing protein. (317 aa)
CCDC84Coiled-coil domain containing 84. (331 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
ENSPANP00000043082Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
ENSPANP00000042764Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
ENSPANP00000041983Uncharacterized protein. (422 aa)
ZMAT2Zinc finger matrin-type 2. (195 aa)
SF3A3Splicing factor 3a subunit 3. (504 aa)
ENSPANP00000040434RRM domain-containing protein. (180 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
LSM5-3U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
ENSPANP00000035299Sm domain-containing protein. (127 aa)
C3orf49Chromosome 3 open reading frame 49. (292 aa)
ENSPANP00000034859Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (91 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (231 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
ENSPANP00000033318WD_REPEATS_REGION domain-containing protein. (328 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
PRPF31Nop domain-containing protein. (508 aa)
HTATSF1HIV-1 Tat specific factor 1. (703 aa)
ZNF608Zinc finger protein 608. (1512 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
RBMX2RNA binding motif protein X-linked 2. (327 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
DDX39BDExD-box helicase 39B. (428 aa)
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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