(122 nodes) Homeobox, conserved site network (Papio anubis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARX	Aristaless related homeobox. (516 aa)
	RHOXF1	Rhox homeobox family member 1. (185 aa)
	ANHX	Anomalous homeobox. (379 aa)
	BARHL2	BarH like homeobox 2. (388 aa)
	IRX2	Iroquois homeobox 2. (455 aa)
	RHOXF2	Homeobox domain-containing protein. (285 aa)
	GBX1	Gastrulation brain homeobox 1. (362 aa)
	PDX1	Pancreatic and duodenal homeobox 1. (281 aa)
	NKX2-6	NK2 homeobox 6. (301 aa)
	OTP	Orthopedia homeobox. (325 aa)
	POU1F1	POU domain protein. (317 aa)
	PAX7	Paired box 7. (514 aa)
	RAX	Retina and anterior neural fold homeobox. (347 aa)
	DUXB	Double homeobox B. (345 aa)
	ZFHX3	Zinc finger homeobox 3. (3697 aa)
	VAX2	Ventral anterior homeobox 2. (290 aa)
	ALX1	ALX homeobox 1. (326 aa)
	PBX1	PBX homeobox 1. (430 aa)
	LHX4	LIM homeobox 4. (390 aa)
	ESX1	ESX homeobox 1. (359 aa)
	PHOX2A	Paired like homeobox 2A. (284 aa)
	CRX	Cone-rod homeobox. (299 aa)
	LHX5	LIM homeobox 5. (402 aa)
	HOXD9	Homeobox D9. (352 aa)
	EMX1	Empty spiracles homeobox 1. (290 aa)
	HESX1	HESX homeobox 1. (185 aa)
	HOXD3	Homeobox D3. (432 aa)
	HOXA5	Homeobox A5 (Predicted). (270 aa)
	HOXA6	Homeobox A6. (233 aa)
	ALX4	ALX homeobox 4. (409 aa)
	RAX2	Retina and anterior neural fold homeobox 2. (184 aa)
	HOXD1	Homeobox D1. (328 aa)
	HLX	H2.0 like homeobox. (494 aa)
	ZFHX4	Zinc finger homeobox 4. (3615 aa)
	HOXC13	Homeobox C13. (318 aa)
	LEUTX	Leucine twenty homeobox. (198 aa)
	POU3F1	POU domain protein. (427 aa)
	GBX2	Gastrulation brain homeobox 2. (348 aa)
	HOXC10	Homeobox C10. (341 aa)
	NKX2-5	NK2 homeobox 5. (324 aa)
	DMBX1	Diencephalon/mesencephalon homeobox 1. (382 aa)
	HOXC12	Homeobox C12. (280 aa)
	HOXA2	Homeobox protein Hox-A2; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Proboscipedia subfamily. (377 aa)
	TLX3	T cell leukemia homeobox 3. (291 aa)
	BARX2	BARX homeobox 2. (279 aa)
	HOXA11	Homeobox A11 (Predicted). (311 aa)
	DPRX	Divergent-paired related homeobox. (192 aa)
	IRX4	Iroquois homeobox 4. (515 aa)
	DBX2	Developing brain homeobox 2. (327 aa)
	HOXA1	Homeobox A1, isoform 1 (Predicted). (335 aa)
	ALX3	ALX homeobox 3. (343 aa)
	IRX5	Iroquois homeobox 5. (483 aa)
	IRX6	Iroquois homeobox 6. (446 aa)
	POU5F1	POU domain protein. (360 aa)
	GSC	Goosecoid homeobox. (259 aa)
	ISL2	ISL LIM homeobox 2. (363 aa)
	PHOX2B	Paired like homeobox 2B. (314 aa)
	HOXD13	Homeobox D13. (343 aa)
	GSX1	GS homeobox 1. (264 aa)
	SIX5	SIX homeobox 5. (741 aa)
	CUX1	Homeobox protein cut-like. (1493 aa)
	VSX2	Visual system homeobox 2. (380 aa)
	GSC2	Goosecoid homeobox 2. (199 aa)
	VENTX	VENT homeobox. (260 aa)
	VAX1	Ventral anterior homeobox 1. (333 aa)
	NKX1-2	NK1 homeobox 2. (309 aa)
	NKX2-8	NK2 homeobox 8. (239 aa)
	NKX2-4	NK2 homeobox 4. (356 aa)
	VSX1	Visual system homeobox 1. (365 aa)
	MEOX2	Mesenchyme homeobox 2. (291 aa)
	NKX6-1	NK6 homeobox 1. (366 aa)
	LMX1A	LIM homeobox transcription factor 1 alpha. (382 aa)
	SIX2	SIX homeobox 2. (290 aa)
	ZFHX2	Zinc finger homeobox 2. (2571 aa)
	GSX2	GS homeobox 2. (303 aa)
	HOXA4	Homeobox A4 (Predicted). (320 aa)
	BSX	Brain specific homeobox. (204 aa)
	EVX1	Even-skipped homeobox 1. (408 aa)
	DLX2	Distal-less homeobox 2. (328 aa)
	HOXD4	Homeobox D4. (255 aa)
	BARHL1	BarH like homeobox 1. (358 aa)
	PRRX2	Paired related homeobox 2. (252 aa)
	LHX2	LIM homeobox 2. (406 aa)
	LMX1B	LIM homeobox transcription factor 1 beta. (373 aa)
	BARX1	BARX homeobox 1. (254 aa)
	HOXB1	Homeobox B1. (304 aa)
	HOXB4	Homeobox B4. (251 aa)
	HOXB5	Homeobox B5. (269 aa)
	HOXB6	Homeobox B6. (224 aa)
	HOXB9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
	DLX4	Distal-less homeobox 4. (240 aa)
	LHX1	LIM homeobox 1. (406 aa)
	HHEX	Hematopoietically expressed homeobox. (270 aa)
	TLX1	T cell leukemia homeobox 1. (333 aa)
	LBX1	Ladybird homeobox 1. (281 aa)
	PITX3	Homeobox protein. (302 aa)
	HOXA13	Homeobox A13. (367 aa)
	PBX3	Homeobox domain-containing protein. (395 aa)
	NKX2-1	NK2 homeobox 1. (401 aa)
	ENSPANP00000024615	Homeobox domain-containing protein. (265 aa)
	DBX1	Developing brain homeobox 1. (344 aa)
	HOXB2	Homeobox B2. (337 aa)
	NKX1-1	NK1 homeobox 1. (411 aa)
	ENSPANP00000028917	Homeobox domain-containing protein. (300 aa)
	EN1	Homeobox protein engrailed-like. (396 aa)
	LOC100997336	Homeobox domain-containing protein. (254 aa)
	PROP1	PROP paired-like homeobox 1. (226 aa)
	SHOX2	Short stature homeobox 2. (355 aa)
	CUX2	Homeobox protein cut-like. (1486 aa)
	NKX6-2	NK6 homeobox 2. (255 aa)
	SIX4	SIX homeobox 4. (780 aa)
	PAX4	Paired box 4. (351 aa)
	NKX2-3	NK2 homeobox 3. (365 aa)
	OTX2	Orthodenticle homeobox 2. (289 aa)
	POU2F1	POU domain protein. (750 aa)
	PAX6	Paired box 6. (462 aa)
	HOXC6	Homeobox C6. (235 aa)
	LHX6	LIM homeobox 6. (435 aa)
	PRRX1	Paired related homeobox 1. (217 aa)
	POU2F2	POU domain protein. (618 aa)
	DRGX	Dorsal root ganglia homeobox. (264 aa)
	LHX3	LIM homeobox 3. (402 aa)

Your Current Organism:

Papio anubis

NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALX3	LHX3	ENSPANP00000012295	ENSPANP00000047106	ALX homeobox 3.	LIM homeobox 3.	0.776
ALX3	LHX4	ENSPANP00000012295	ENSPANP00000004705	ALX homeobox 3.	LIM homeobox 4.	0.776
ARX	RHOXF2	ENSPANP00000000123	ENSPANP00000001517	Aristaless related homeobox.	Homeobox domain-containing protein.	0.556
ARX	TLX1	ENSPANP00000000123	ENSPANP00000020889	Aristaless related homeobox.	T cell leukemia homeobox 1.	0.639
ARX	TLX3	ENSPANP00000000123	ENSPANP00000010513	Aristaless related homeobox.	T cell leukemia homeobox 3.	0.639
BARHL1	LHX1	ENSPANP00000018816	ENSPANP00000020440	BarH like homeobox 1.	LIM homeobox 1.	0.403
BARHL1	LHX5	ENSPANP00000018816	ENSPANP00000006335	BarH like homeobox 1.	LIM homeobox 5.	0.403
BARHL1	LMX1A	ENSPANP00000018816	ENSPANP00000017497	BarH like homeobox 1.	LIM homeobox transcription factor 1 alpha.	0.402
BARHL2	PBX3	ENSPANP00000001159	ENSPANP00000021925	BarH like homeobox 2.	Homeobox domain-containing protein.	0.459
BARX1	ISL2	ENSPANP00000019427	ENSPANP00000014300	BARX homeobox 1.	ISL LIM homeobox 2.	0.410
BARX1	LHX6	ENSPANP00000019427	ENSPANP00000044228	BARX homeobox 1.	LIM homeobox 6.	0.476
BARX2	PHOX2A	ENSPANP00000010912	ENSPANP00000004993	BARX homeobox 2.	Paired like homeobox 2A.	0.481
BSX	LHX2	ENSPANP00000018105	ENSPANP00000018899	Brain specific homeobox.	LIM homeobox 2.	0.423
BSX	LHX4	ENSPANP00000018105	ENSPANP00000004705	Brain specific homeobox.	LIM homeobox 4.	0.723
CRX	POU1F1	ENSPANP00000005647	ENSPANP00000003055	Cone-rod homeobox.	POU domain protein.	0.604
CUX1	GSX1	ENSPANP00000015535	ENSPANP00000015449	Homeobox protein cut-like.	GS homeobox 1.	0.422
CUX1	PAX6	ENSPANP00000015535	ENSPANP00000039643	Homeobox protein cut-like.	Paired box 6.	0.564
CUX2	EMX1	ENSPANP00000034001	ENSPANP00000006395	Homeobox protein cut-like.	Empty spiracles homeobox 1.	0.564
CUX2	HOXA11	ENSPANP00000034001	ENSPANP00000010946	Homeobox protein cut-like.	Homeobox A11 (Predicted).	0.515
CUX2	HOXA13	ENSPANP00000034001	ENSPANP00000021294	Homeobox protein cut-like.	Homeobox A13.	0.522

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