STRINGSTRING
UPF3B UPF3B UPF3A UPF3A UPF1 UPF1 CASC3 CASC3 EIF4A3 EIF4A3 UPF2 UPF2 RBM8A RBM8A LOC105536165 LOC105536165 MAGOHB MAGOHB MAGOH MAGOH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
UPF3AUPF3A regulator of nonsense mediated mRNA decay. (419 aa)
UPF1UPF1 RNA helicase and ATPase. (1052 aa)
CASC3CASC3 exon junction complex subunit. (634 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (354 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1262 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LOC105536165RRM domain-containing protein. (256 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
MAGOHMago homolog, exon junction complex subunit. (149 aa)
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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