(10 nodes) NMS complex network (Mandrillus leucophaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NUF2	NUF2 component of NDC80 kinetochore complex. (464 aa)
	ENSMLEP00000003186	Uncharacterized protein. (143 aa)
	DSN1	DSN1 component of MIS12 kinetochore complex. (354 aa)
	MIS12	Uncharacterized protein. (205 aa)
	NSL1	NSL1 component of MIS12 kinetochore complex. (190 aa)
	SPC24	SPC24 component of NDC80 kinetochore complex. (205 aa)
	PMF1-BGLAP	PMF1-BGLAP readthrough. (171 aa)
	NDC80	NDC80 kinetochore complex component. (642 aa)
	ZWINT	ZW10 interacting kinetochore protein. (277 aa)
	SPC25	SPC25 component of NDC80 kinetochore complex. (224 aa)

Your Current Organism:

Mandrillus leucophaeus

NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSN1	ENSMLEP00000003186	ENSMLEP00000003877	ENSMLEP00000003186	DSN1 component of MIS12 kinetochore complex.	Uncharacterized protein.	0.973
DSN1	MIS12	ENSMLEP00000003877	ENSMLEP00000006583	DSN1 component of MIS12 kinetochore complex.	Uncharacterized protein.	0.977
DSN1	NDC80	ENSMLEP00000003877	ENSMLEP00000019972	DSN1 component of MIS12 kinetochore complex.	NDC80 kinetochore complex component.	0.947
DSN1	NSL1	ENSMLEP00000003877	ENSMLEP00000008833	DSN1 component of MIS12 kinetochore complex.	NSL1 component of MIS12 kinetochore complex.	0.973
DSN1	NUF2	ENSMLEP00000003877	ENSMLEP00000000131	DSN1 component of MIS12 kinetochore complex.	NUF2 component of NDC80 kinetochore complex.	0.968
DSN1	PMF1-BGLAP	ENSMLEP00000003877	ENSMLEP00000016955	DSN1 component of MIS12 kinetochore complex.	PMF1-BGLAP readthrough.	0.993
DSN1	SPC24	ENSMLEP00000003877	ENSMLEP00000014880	DSN1 component of MIS12 kinetochore complex.	SPC24 component of NDC80 kinetochore complex.	0.968
DSN1	SPC25	ENSMLEP00000003877	ENSMLEP00000028270	DSN1 component of MIS12 kinetochore complex.	SPC25 component of NDC80 kinetochore complex.	0.921
DSN1	ZWINT	ENSMLEP00000003877	ENSMLEP00000026391	DSN1 component of MIS12 kinetochore complex.	ZW10 interacting kinetochore protein.	0.922
ENSMLEP00000003186	DSN1	ENSMLEP00000003186	ENSMLEP00000003877	Uncharacterized protein.	DSN1 component of MIS12 kinetochore complex.	0.973
ENSMLEP00000003186	MIS12	ENSMLEP00000003186	ENSMLEP00000006583	Uncharacterized protein.	Uncharacterized protein.	0.943
ENSMLEP00000003186	NDC80	ENSMLEP00000003186	ENSMLEP00000019972	Uncharacterized protein.	NDC80 kinetochore complex component.	0.853
ENSMLEP00000003186	NSL1	ENSMLEP00000003186	ENSMLEP00000008833	Uncharacterized protein.	NSL1 component of MIS12 kinetochore complex.	0.899
ENSMLEP00000003186	NUF2	ENSMLEP00000003186	ENSMLEP00000000131	Uncharacterized protein.	NUF2 component of NDC80 kinetochore complex.	0.892
ENSMLEP00000003186	PMF1-BGLAP	ENSMLEP00000003186	ENSMLEP00000016955	Uncharacterized protein.	PMF1-BGLAP readthrough.	0.930
ENSMLEP00000003186	SPC24	ENSMLEP00000003186	ENSMLEP00000014880	Uncharacterized protein.	SPC24 component of NDC80 kinetochore complex.	0.859
ENSMLEP00000003186	SPC25	ENSMLEP00000003186	ENSMLEP00000028270	Uncharacterized protein.	SPC25 component of NDC80 kinetochore complex.	0.832
ENSMLEP00000003186	ZWINT	ENSMLEP00000003186	ENSMLEP00000026391	Uncharacterized protein.	ZW10 interacting kinetochore protein.	0.840
MIS12	DSN1	ENSMLEP00000006583	ENSMLEP00000003877	Uncharacterized protein.	DSN1 component of MIS12 kinetochore complex.	0.977
MIS12	ENSMLEP00000003186	ENSMLEP00000006583	ENSMLEP00000003186	Uncharacterized protein.	Uncharacterized protein.	0.943