STRINGSTRING
WBP4 WBP4 ENSMLEP00000001471 ENSMLEP00000001471 SF3B5 SF3B5 LOC105542818 LOC105542818 BUD13 BUD13 TXNL4A TXNL4A ENSMLEP00000003707 ENSMLEP00000003707 IK IK SNRNP200 SNRNP200 ENSMLEP00000004386 ENSMLEP00000004386 RNF113A RNF113A SNRPB SNRPB ENSMLEP00000005622 ENSMLEP00000005622 LSM5 LSM5 SF3B1 SF3B1 LSM4 LSM4 ENSMLEP00000008607 ENSMLEP00000008607 LOC105554965 LOC105554965 SNRPD1 SNRPD1 RBMX2 RBMX2 SF3B2 SF3B2 SNRPB2 SNRPB2 PHF5A PHF5A PRPF8 PRPF8 SNRPA1 SNRPA1 ENSMLEP00000028280 ENSMLEP00000028280 SF3B4 SF3B4 RNF113B RNF113B LSM8 LSM8 SNIP1 SNIP1 PRPF4 PRPF4 PRPF3 PRPF3 ENSMLEP00000033809 ENSMLEP00000033809 PRPF38A PRPF38A ZMAT2 ZMAT2 SF3A1 SF3A1 CWC27 CWC27 SNU13 SNU13 CWC22 CWC22 SNRPE SNRPE DHX16 DHX16 SF3B3 SF3B3 SMU1 SMU1 ENSMLEP00000013046 ENSMLEP00000013046 SF3A3 SF3A3 LSM7 LSM7 ENSMLEP00000014058 ENSMLEP00000014058 SNRPG SNRPG PRPF31 PRPF31 ENSMLEP00000016299 ENSMLEP00000016299 PRPF6 PRPF6 EFTUD2 EFTUD2 SNRPF SNRPF SNRPD2 SNRPD2 LSM5-2 LSM5-2 MFAP1 MFAP1 ENSMLEP00000020013 ENSMLEP00000020013 LSM6 LSM6 LSM8-2 LSM8-2 LSM3 LSM3 ENSMLEP00000024071 ENSMLEP00000024071 SART1 SART1 LOC105535732 LOC105535732 ENSMLEP00000025623 ENSMLEP00000025623 LSM2 LSM2 SNRPD3 SNRPD3 ENSMLEP00000000335 ENSMLEP00000000335 LOC105528776 LOC105528776
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WBP4WW domain binding protein 4. (375 aa)
ENSMLEP00000001471RRM domain-containing protein. (317 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC105542818Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
BUD13BUD13 homolog. (618 aa)
TXNL4AThioredoxin like 4A. (71 aa)
ENSMLEP00000003707SF3A2 domain-containing protein. (182 aa)
IKIK cytokine. (541 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
ENSMLEP00000004386Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
RNF113ARing finger protein 113A. (344 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ENSMLEP00000005622Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SF3B1Splicing factor 3b subunit 1. (1200 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (231 aa)
ENSMLEP00000008607Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
LOC105554965Uncharacterized protein. (436 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (130 aa)
RBMX2RNA binding motif protein X-linked 2. (322 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (208 aa)
PHF5APHD finger protein 5A. (110 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
ENSMLEP00000028280Uncharacterized protein. (115 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
RNF113BRing finger protein 113B. (298 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (88 aa)
SNIP1Smad nuclear interacting protein 1. (396 aa)
PRPF4Pre-mRNA processing factor 4. (543 aa)
PRPF3Pre-mRNA processing factor 3. (580 aa)
ENSMLEP00000033809PWI domain-containing protein. (560 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (158 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
DHX16DEAH-box helicase 16. (1044 aa)
SF3B3Splicing factor 3b subunit 3. (1197 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
ENSMLEP00000013046Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SF3A3Splicing factor 3a subunit 3. (501 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ENSMLEP00000014058Sm domain-containing protein. (91 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
ENSMLEP00000016299Uncharacterized protein. (54 aa)
PRPF6Pre-mRNA processing factor 6. (717 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
SNRPFSm domain-containing protein. (127 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (69 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (81 aa)
MFAP1Microfibril associated protein 1. (439 aa)
ENSMLEP00000020013annotation not available (74 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ENSMLEP00000024071Sm domain-containing protein. (71 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (729 aa)
LOC105535732Matrin-type domain-containing protein. (470 aa)
ENSMLEP00000025623Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (90 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
ENSMLEP00000000335Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
LOC105528776RRM domain-containing protein. (180 aa)
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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