22 items (Mandrillus leucophaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LRRC4C	Leucine rich repeat containing 4C. (640 aa)
	ENSMLEP00000005530	Uncharacterized protein. (112 aa)
	EFNA5	Ephrin A5; Belongs to the ephrin family. (219 aa)
	FLRT3	Fibronectin leucine rich transmembrane protein 3. (649 aa)
	SLITRK2	SLIT and NTRK like family member 2. (845 aa)
	GPC4	Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (556 aa)
	PTPRD	Protein tyrosine phosphatase receptor type D. (1912 aa)
	ENSMLEP00000029552	Uncharacterized protein. (356 aa)
	LRFN3	Leucine rich repeat and fibronectin type III domain containing 3. (628 aa)
	SPARCL1	SPARC like 1. (661 aa)
	NTNG1	Netrin G1. (539 aa)
	NRG1	Neuregulin 1. (713 aa)
	NTNG2	Netrin G2. (452 aa)
	PTPRF	Protein tyrosine phosphatase receptor type F. (1913 aa)
	LRFN5	Leucine rich repeat and fibronectin type III domain containing 5. (719 aa)
	IL1RAP	Interleukin 1 receptor accessory protein. (687 aa)
	LRRC4B	Leucine rich repeat containing 4B. (715 aa)
	SLITRK3	SLIT and NTRK like family member 3. (979 aa)
	LRRC4	Leucine rich repeat containing 4. (635 aa)
	SLITRK1	SLIT and NTRK like family member 1. (696 aa)
	NRXN1	Neurexin 1. (1182 aa)
	PTPRS	Protein tyrosine phosphatase receptor type S. (1704 aa)

Your Current Organism:

Mandrillus leucophaeus

NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMLEP00000029552	NTNG1	ENSMLEP00000029552	ENSMLEP00000022813	Uncharacterized protein.	Netrin G1.	0.779
ENSMLEP00000029552	NTNG2	ENSMLEP00000029552	ENSMLEP00000017137	Uncharacterized protein.	Netrin G2.	0.612
ENSMLEP00000029552	PTPRD	ENSMLEP00000029552	ENSMLEP00000035041	Uncharacterized protein.	Protein tyrosine phosphatase receptor type D.	0.642
ENSMLEP00000029552	PTPRF	ENSMLEP00000029552	ENSMLEP00000011596	Uncharacterized protein.	Protein tyrosine phosphatase receptor type F.	0.610
ENSMLEP00000029552	PTPRS	ENSMLEP00000029552	ENSMLEP00000000838	Uncharacterized protein.	Protein tyrosine phosphatase receptor type S.	0.684
FLRT3	NTNG1	ENSMLEP00000007669	ENSMLEP00000022813	Fibronectin leucine rich transmembrane protein 3.	Netrin G1.	0.532
IL1RAP	PTPRD	ENSMLEP00000009698	ENSMLEP00000035041	Interleukin 1 receptor accessory protein.	Protein tyrosine phosphatase receptor type D.	0.976
IL1RAP	PTPRF	ENSMLEP00000009698	ENSMLEP00000011596	Interleukin 1 receptor accessory protein.	Protein tyrosine phosphatase receptor type F.	0.845
IL1RAP	PTPRS	ENSMLEP00000009698	ENSMLEP00000000838	Interleukin 1 receptor accessory protein.	Protein tyrosine phosphatase receptor type S.	0.884
LRFN3	NTNG1	ENSMLEP00000028718	ENSMLEP00000022813	Leucine rich repeat and fibronectin type III domain containing 3.	Netrin G1.	0.536
LRFN3	PTPRD	ENSMLEP00000028718	ENSMLEP00000035041	Leucine rich repeat and fibronectin type III domain containing 3.	Protein tyrosine phosphatase receptor type D.	0.630
LRFN3	PTPRF	ENSMLEP00000028718	ENSMLEP00000011596	Leucine rich repeat and fibronectin type III domain containing 3.	Protein tyrosine phosphatase receptor type F.	0.689
LRFN3	PTPRS	ENSMLEP00000028718	ENSMLEP00000000838	Leucine rich repeat and fibronectin type III domain containing 3.	Protein tyrosine phosphatase receptor type S.	0.662
LRFN5	LRRC4C	ENSMLEP00000009915	ENSMLEP00000005006	Leucine rich repeat and fibronectin type III domain containing 5.	Leucine rich repeat containing 4C.	0.429
LRFN5	NTNG1	ENSMLEP00000009915	ENSMLEP00000022813	Leucine rich repeat and fibronectin type III domain containing 5.	Netrin G1.	0.594
LRFN5	PTPRD	ENSMLEP00000009915	ENSMLEP00000035041	Leucine rich repeat and fibronectin type III domain containing 5.	Protein tyrosine phosphatase receptor type D.	0.899
LRFN5	PTPRF	ENSMLEP00000009915	ENSMLEP00000011596	Leucine rich repeat and fibronectin type III domain containing 5.	Protein tyrosine phosphatase receptor type F.	0.789
LRFN5	PTPRS	ENSMLEP00000009915	ENSMLEP00000000838	Leucine rich repeat and fibronectin type III domain containing 5.	Protein tyrosine phosphatase receptor type S.	0.825
LRRC4	NTNG1	ENSMLEP00000001449	ENSMLEP00000022813	Leucine rich repeat containing 4.	Netrin G1.	0.857
LRRC4	NTNG2	ENSMLEP00000001449	ENSMLEP00000017137	Leucine rich repeat containing 4.	Netrin G2.	0.993