STRINGSTRING
SRSF5 SRSF5 BCL2L2-PABPN1 BCL2L2-PABPN1 DDX39B DDX39B CLP1 CLP1 ALYREF ALYREF CPSF1 CPSF1 MAGOH MAGOH LOC105554415 LOC105554415 FIP1L1 FIP1L1 SRSF11 SRSF11 NUDT21 NUDT21 POLDIP3 POLDIP3 THOC7 THOC7 SRSF3 SRSF3 SRSF9 SRSF9 MAGOHB MAGOHB SYMPK SYMPK SRSF1 SRSF1 LOC105536165 LOC105536165 C12orf50 C12orf50 NCBP2 NCBP2 ENSMLEP00000031093 ENSMLEP00000031093 CSTF3 CSTF3 ENSMLEP00000030703 ENSMLEP00000030703 RBM8A RBM8A SREK1 SREK1 SRSF7 SRSF7 SARNP SARNP CPSF4L CPSF4L SRRM1 SRRM1 LOC105548633 LOC105548633 SLU7 SLU7 WDR33 WDR33 RNPS1 RNPS1 CSTF2 CSTF2 ENSMLEP00000024216 ENSMLEP00000024216 CDC40 CDC40 THOC2 THOC2 CPSF4 CPSF4 LOC105548167 LOC105548167 THOC1 THOC1 FYTTD1 FYTTD1 EIF4A3 EIF4A3 PAPOLA PAPOLA ENSMLEP00000016142 ENSMLEP00000016142 U2AF2 U2AF2 CHTOP CHTOP SRSF4 SRSF4 SRSF6 SRSF6 THOC5 THOC5 CPSF7 CPSF7 NCBP1 NCBP1 ENSMLEP00000011876 ENSMLEP00000011876 LUZP4 LUZP4 DHX38 DHX38 LOC105555555 LOC105555555 CPSF2 CPSF2 CASC3 CASC3 CPSF3 CPSF3 SRSF2 SRSF2 PCF11 PCF11 CSTF1 CSTF1 LOC105535221 LOC105535221 UPF3B UPF3B ZC3H11A ZC3H11A THOC6 THOC6 DDX39A DDX39A U2AF1L4 U2AF1L4 CPSF6 CPSF6 THOC3 THOC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
BCL2L2-PABPN1BCL2L2-PABPN1 readthrough. (333 aa)
DDX39BDExD-box helicase 39B. (428 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (436 aa)
ALYREFAly/REF export factor. (207 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1460 aa)
MAGOHMago homolog, exon junction complex subunit. (149 aa)
LOC105554415Uncharacterized protein. (139 aa)
FIP1L1Factor interacting with PAPOLA and CPSF1. (594 aa)
SRSF11Serine and arginine rich splicing factor 11. (483 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
POLDIP3DNA polymerase delta interacting protein 3. (283 aa)
THOC7THO complex 7. (201 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
SRSF9Serine and arginine rich splicing factor 9. (208 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
SYMPKSymplekin. (1304 aa)
SRSF1Serine and arginine rich splicing factor 1. (248 aa)
LOC105536165RRM domain-containing protein. (256 aa)
C12orf50Chromosome 12 open reading frame 50. (414 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (89 aa)
ENSMLEP00000031093Uncharacterized protein. (136 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
ENSMLEP00000030703SAP domain-containing protein. (173 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (626 aa)
SRSF7Serine and arginine rich splicing factor 7. (238 aa)
SARNPSAP domain-containing protein. (162 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
SRRM1PWI domain-containing protein. (898 aa)
LOC105548633SAP domain-containing protein. (202 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
WDR33WD repeat domain 33. (1336 aa)
RNPS1RNA binding protein with serine rich domain 1. (305 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
ENSMLEP00000024216Uncharacterized protein. (64 aa)
CDC40Cell division cycle 40. (579 aa)
THOC2THO complex 2. (1593 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
LOC105548167RRM domain-containing protein. (275 aa)
THOC1THO complex 1. (660 aa)
FYTTD1Forty-two-three domain containing 1. (286 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (354 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
ENSMLEP00000016142PWI domain-containing protein. (761 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (512 aa)
CHTOPChromatin target of PRMT1. (277 aa)
SRSF4Serine and arginine rich splicing factor 4. (494 aa)
SRSF6Serine and arginine rich splicing factor 6. (214 aa)
THOC5THO complex 5. (683 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (489 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
ENSMLEP00000011876Uncharacterized protein. (213 aa)
LUZP4Leucine zipper protein 4. (306 aa)
DHX38DEAH-box helicase 38. (1234 aa)
LOC105555555Uncharacterized protein. (237 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CASC3CASC3 exon junction complex subunit. (634 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (684 aa)
SRSF2Serine and arginine rich splicing factor 2. (189 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1555 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
LOC105535221Uncharacterized protein. (248 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
ZC3H11AUncharacterized protein. (810 aa)
THOC6THO complex 6. (341 aa)
DDX39ADExD-box helicase 39A. (435 aa)
U2AF1L4Uncharacterized protein. (220 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (568 aa)
THOC3THO complex 3. (351 aa)
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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