59 items (Mandrillus leucophaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB2B	RAB2B, member RAS oncogene family. (216 aa)
	RAB3B	RAB3B, member RAS oncogene family. (228 aa)
	ENSMLEP00000008760	Uncharacterized protein. (169 aa)
	RAB9B	RAB9B, member RAS oncogene family. (201 aa)
	RAB26	RAB26, member RAS oncogene family. (190 aa)
	RAB25	RAB25, member RAS oncogene family. (213 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	CRACR2A	Calcium release activated channel regulator 2A. (732 aa)
	RAB4A	RAB4A, member RAS oncogene family. (220 aa)
	RAB40C	RAB40C, member RAS oncogene family. (246 aa)
	RAB19	RAB19, member RAS oncogene family. (217 aa)
	RAB11A	RAB11A, member RAS oncogene family. (198 aa)
	RAB21	RAB21, member RAS oncogene family. (223 aa)
	RAB39B	RAB39B, member RAS oncogene family. (213 aa)
	RAB33B	RAB33B, member RAS oncogene family. (229 aa)
	RAB3C	RAB3C, member RAS oncogene family. (165 aa)
	RAB7B	RAB7B, member RAS oncogene family. (199 aa)
	RAB18	RAB18, member RAS oncogene family. (234 aa)
	RAB24	RAB24, member RAS oncogene family. (203 aa)
	RAB8B	RAB8B, member RAS oncogene family. (207 aa)
	RAB36	RAB36, member RAS oncogene family. (333 aa)
	RAB37	RAB37, member RAS oncogene family. (223 aa)
	RAB11B	Uncharacterized protein. (448 aa)
	RAB38	RAB38, member RAS oncogene family. (211 aa)
	RAB14	RAB14, member RAS oncogene family. (215 aa)
	RAB33A	RAB33A, member RAS oncogene family. (237 aa)
	RAB44	RAB44, member RAS oncogene family. (1010 aa)
	RAB34	RAB34, member RAS oncogene family. (225 aa)
	RAB5B	RAB5B, member RAS oncogene family. (221 aa)
	RAB9A	RAB9A, member RAS oncogene family. (201 aa)
	RASEF	RAS and EF-hand domain containing. (740 aa)
	RAB42	RAB42, member RAS oncogene family. (218 aa)
	RAB22A	RAB22A, member RAS oncogene family. (194 aa)
	ENSMLEP00000023777	Uncharacterized protein. (177 aa)
	RAB5C	RAB5C, member RAS oncogene family. (249 aa)
	RAB15	RAB15, member RAS oncogene family. (257 aa)
	RAB41	RAB41, member RAS oncogene family. (223 aa)
	RAB4B	Uncharacterized protein. (221 aa)
	ENSMLEP00000028984	Uncharacterized protein. (196 aa)
	RAB6A	RAB6A, member RAS oncogene family. (208 aa)
	RAB10	RAB10, member RAS oncogene family. (200 aa)
	RAB6B	RAB6B, member RAS oncogene family. (195 aa)
	RAB30	RAB30, member RAS oncogene family. (203 aa)
	RAB27A	RAB27A, member RAS oncogene family. (179 aa)
	RAB31	RAB31, member RAS oncogene family. (259 aa)
	RAB35	RAB35, member RAS oncogene family. (319 aa)
	RAB3A	RAB3A, member RAS oncogene family. (220 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	RAB8A	RAB8A, member RAS oncogene family. (207 aa)
	RAB43	RAB43, member RAS oncogene family. (212 aa)
	RAB1B	RAB1B, member RAS oncogene family. (214 aa)
	RAB17	RAB17, member RAS oncogene family. (212 aa)
	RAB2A	RAB2A, member RAS oncogene family. (196 aa)
	ENSMLEP00000035429	Uncharacterized protein. (216 aa)
	RAB13	Uncharacterized protein. (203 aa)
	RAB23	RAB23, member RAS oncogene family. (237 aa)
	RAB1A	Uncharacterized protein. (205 aa)
	RAB3D	RAB3D, member RAS oncogene family. (219 aa)

Your Current Organism:

Mandrillus leucophaeus

NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRACR2A	RASEF	ENSMLEP00000040279	ENSMLEP00000020735	Calcium release activated channel regulator 2A.	RAS and EF-hand domain containing.	0.477
ENSMLEP00000008760	ENSMLEP00000028984	ENSMLEP00000008760	ENSMLEP00000028984	Uncharacterized protein.	Uncharacterized protein.	0.440
ENSMLEP00000008760	RAB10	ENSMLEP00000008760	ENSMLEP00000030233	Uncharacterized protein.	RAB10, member RAS oncogene family.	0.458
ENSMLEP00000008760	RAB11A	ENSMLEP00000008760	ENSMLEP00000016638	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.603
ENSMLEP00000008760	RAB11B	ENSMLEP00000008760	ENSMLEP00000012934	Uncharacterized protein.	Uncharacterized protein.	0.609
ENSMLEP00000008760	RAB13	ENSMLEP00000008760	ENSMLEP00000036250	Uncharacterized protein.	Uncharacterized protein.	0.438
ENSMLEP00000008760	RAB15	ENSMLEP00000008760	ENSMLEP00000027376	Uncharacterized protein.	RAB15, member RAS oncogene family.	0.449
ENSMLEP00000008760	RAB1B	ENSMLEP00000008760	ENSMLEP00000033370	Uncharacterized protein.	RAB1B, member RAS oncogene family.	0.894
ENSMLEP00000008760	RAB25	ENSMLEP00000008760	ENSMLEP00000005795	Uncharacterized protein.	RAB25, member RAS oncogene family.	0.401
ENSMLEP00000008760	RAB41	ENSMLEP00000008760	ENSMLEP00000027856	Uncharacterized protein.	RAB41, member RAS oncogene family.	0.497
ENSMLEP00000008760	RAB6A	ENSMLEP00000008760	ENSMLEP00000029165	Uncharacterized protein.	RAB6A, member RAS oncogene family.	0.479
ENSMLEP00000008760	RAB6B	ENSMLEP00000008760	ENSMLEP00000030585	Uncharacterized protein.	RAB6B, member RAS oncogene family.	0.468
ENSMLEP00000008760	RAB8A	ENSMLEP00000008760	ENSMLEP00000033333	Uncharacterized protein.	RAB8A, member RAS oncogene family.	0.452
ENSMLEP00000008760	RAB8B	ENSMLEP00000008760	ENSMLEP00000019297	Uncharacterized protein.	RAB8B, member RAS oncogene family.	0.454
ENSMLEP00000008760	RAB9A	ENSMLEP00000008760	ENSMLEP00000003889	Uncharacterized protein.	RAB9A, member RAS oncogene family.	0.411
ENSMLEP00000008760	RAB9B	ENSMLEP00000008760	ENSMLEP00000007750	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.404
ENSMLEP00000023777	RAB11A	ENSMLEP00000023777	ENSMLEP00000016638	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.418
ENSMLEP00000023777	RAB11B	ENSMLEP00000023777	ENSMLEP00000012934	Uncharacterized protein.	Uncharacterized protein.	0.426
ENSMLEP00000023777	RAB14	ENSMLEP00000023777	ENSMLEP00000015413	Uncharacterized protein.	RAB14, member RAS oncogene family.	0.535
ENSMLEP00000023777	RAB17	ENSMLEP00000023777	ENSMLEP00000033611	Uncharacterized protein.	RAB17, member RAS oncogene family.	0.420