15 items (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSGGOP00000043483	FCP1 homology domain-containing protein. (218 aa)
	ENSGGOP00000042789	Uncharacterized protein. (147 aa)
	LDLR	Low density lipoprotein receptor. (859 aa)
	GPLD1	Glycosylphosphatidylinositol specific phospholipase D1. (840 aa)
	RGN	Regucalcin. (299 aa)
	KAT5	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (513 aa)
	MFSD2A	Major facilitator superfamily domain containing 2A. (530 aa)
	CTDNEP1	CTD nuclear envelope phosphatase 1. (244 aa)
	NR1H3	Nuclear receptor subfamily 1 group H member 3. (453 aa)
	NR1H2	Nuclear receptor subfamily 1 group H member 2. (461 aa)
	SLC27A1	Solute carrier family 27 member 1. (646 aa)
	DGAT2	Diacylglycerol O-acyltransferase 2. (388 aa)
	SREBF1	Sterol regulatory element binding transcription factor 1. (1177 aa)
	ENSGGOP00000050295	CTD nuclear envelope phosphatase 1 regulatory subunit 1. (142 aa)
	SCARB1	Scavenger receptor class B member 1; Belongs to the CD36 family. (509 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTDNEP1	ENSGGOP00000042789	ENSGGOP00000013435	ENSGGOP00000042789	CTD nuclear envelope phosphatase 1.	Uncharacterized protein.	0.775
CTDNEP1	ENSGGOP00000050295	ENSGGOP00000013435	ENSGGOP00000050295	CTD nuclear envelope phosphatase 1.	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	0.976
DGAT2	SCARB1	ENSGGOP00000002861	ENSGGOP00000046383	Diacylglycerol O-acyltransferase 2.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.461
DGAT2	SLC27A1	ENSGGOP00000002861	ENSGGOP00000004867	Diacylglycerol O-acyltransferase 2.	Solute carrier family 27 member 1.	0.803
DGAT2	SREBF1	ENSGGOP00000002861	ENSGGOP00000050798	Diacylglycerol O-acyltransferase 2.	Sterol regulatory element binding transcription factor 1.	0.571
ENSGGOP00000042789	CTDNEP1	ENSGGOP00000042789	ENSGGOP00000013435	Uncharacterized protein.	CTD nuclear envelope phosphatase 1.	0.775
ENSGGOP00000042789	ENSGGOP00000043483	ENSGGOP00000042789	ENSGGOP00000043483	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.659
ENSGGOP00000042789	ENSGGOP00000050295	ENSGGOP00000042789	ENSGGOP00000050295	Uncharacterized protein.	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	0.548
ENSGGOP00000043483	ENSGGOP00000042789	ENSGGOP00000043483	ENSGGOP00000042789	FCP1 homology domain-containing protein.	Uncharacterized protein.	0.659
ENSGGOP00000043483	ENSGGOP00000050295	ENSGGOP00000043483	ENSGGOP00000050295	FCP1 homology domain-containing protein.	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	0.659
ENSGGOP00000050295	CTDNEP1	ENSGGOP00000050295	ENSGGOP00000013435	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	CTD nuclear envelope phosphatase 1.	0.976
ENSGGOP00000050295	ENSGGOP00000042789	ENSGGOP00000050295	ENSGGOP00000042789	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	Uncharacterized protein.	0.548
ENSGGOP00000050295	ENSGGOP00000043483	ENSGGOP00000050295	ENSGGOP00000043483	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	FCP1 homology domain-containing protein.	0.659
NR1H2	NR1H3	ENSGGOP00000005489	ENSGGOP00000008392	Nuclear receptor subfamily 1 group H member 2.	Nuclear receptor subfamily 1 group H member 3.	0.934
NR1H2	SREBF1	ENSGGOP00000005489	ENSGGOP00000050798	Nuclear receptor subfamily 1 group H member 2.	Sterol regulatory element binding transcription factor 1.	0.632
NR1H3	NR1H2	ENSGGOP00000008392	ENSGGOP00000005489	Nuclear receptor subfamily 1 group H member 3.	Nuclear receptor subfamily 1 group H member 2.	0.934
NR1H3	SCARB1	ENSGGOP00000008392	ENSGGOP00000046383	Nuclear receptor subfamily 1 group H member 3.	Scavenger receptor class B member 1; Belongs to the CD36 family.	0.444
NR1H3	SREBF1	ENSGGOP00000008392	ENSGGOP00000050798	Nuclear receptor subfamily 1 group H member 3.	Sterol regulatory element binding transcription factor 1.	0.766
SCARB1	DGAT2	ENSGGOP00000046383	ENSGGOP00000002861	Scavenger receptor class B member 1; Belongs to the CD36 family.	Diacylglycerol O-acyltransferase 2.	0.461
SCARB1	NR1H3	ENSGGOP00000046383	ENSGGOP00000008392	Scavenger receptor class B member 1; Belongs to the CD36 family.	Nuclear receptor subfamily 1 group H member 3.	0.444