STRINGSTRING
ENSGGOP00000052255 ENSGGOP00000052255 G3QFU4_GORGO G3QFU4_GORGO LRMDA LRMDA SF3B3 SF3B3 LSM10 LSM10 SNRPB2 SNRPB2 DDX21 DDX21 MEPCE MEPCE PRPF8 PRPF8 DDX39B DDX39B HEXIM2 HEXIM2 LSM3 LSM3 LSM7 LSM7 ISG20 ISG20 G3R566_GORGO G3R566_GORGO CDK9 CDK9 SART3 SART3 SNRPC SNRPC RBM22 RBM22 EFTUD2 EFTUD2 G3RBC2_GORGO G3RBC2_GORGO TUT1 TUT1 HEXIM1 HEXIM1 SNRPD3 SNRPD3 G3RIN4_GORGO G3RIN4_GORGO G3RK55_GORGO G3RK55_GORGO SNRPA1 SNRPA1 LSM11 LSM11 G3SD12_GORGO G3SD12_GORGO SNRNP70 SNRNP70 RO60 RO60 ENSGGOP00000031775 ENSGGOP00000031775 CCNT2 CCNT2 METTL16 METTL16 LSM8 LSM8 RBMXL2 RBMXL2 SNU13 SNU13 HNRNPU HNRNPU ENSGGOP00000040422 ENSGGOP00000040422 TOE1 TOE1 NCBP2 NCBP2 ENSGGOP00000041134 ENSGGOP00000041134 LARP7 LARP7 ENSGGOP00000044449 ENSGGOP00000044449 ENSGGOP00000045291 ENSGGOP00000045291 ENSGGOP00000045752 ENSGGOP00000045752 PRPF4 PRPF4 LSM4 LSM4 ENSGGOP00000048765 ENSGGOP00000048765 RBM7 RBM7 LSM2 LSM2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSGGOP00000052255Uncharacterized protein. (87 aa)
G3QFU4_GORGOSmall nuclear ribonucleoprotein polypeptide A. (282 aa)
LRMDALeucine rich melanocyte differentiation associated. (226 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
DDX21DExD-box helicase 21. (783 aa)
MEPCEMethylphosphate capping enzyme. (689 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
DDX39BDExD-box helicase 39B. (428 aa)
HEXIM2HEXIM P-TEFb complex subunit 2. (339 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ISG20Interferon stimulated exonuclease gene 20. (181 aa)
G3R566_GORGOGem nuclear organelle associated protein 5. (1286 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (963 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
RBM22RNA binding motif protein 22. (420 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
G3RBC2_GORGOCyclin T1; Belongs to the cyclin family. (611 aa)
TUT1RRM domain-containing protein. (912 aa)
HEXIM1HEXIM P-TEFb complex subunit 1. (359 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
G3RIN4_GORGOSmall nuclear ribonucleoprotein U11/U12 subunit 35. (251 aa)
G3RK55_GORGOPre-mRNA processing factor 31. (499 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
LSM11LSM11, U7 small nuclear RNA associated. (360 aa)
G3SD12_GORGOUncharacterized protein. (463 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (437 aa)
RO60Ro60, Y RNA binding protein. (538 aa)
ENSGGOP00000031775RRM domain-containing protein. (202 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)
METTL16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (585 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
RBMXL2RBMX like 2. (392 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (825 aa)
ENSGGOP00000040422RRM domain-containing protein. (220 aa)
TOE1Target of EGR1, exonuclease. (523 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (138 aa)
ENSGGOP00000041134RNA binding motif protein 41. (413 aa)
LARP7Uncharacterized protein. (589 aa)
ENSGGOP00000044449Uncharacterized protein. (533 aa)
ENSGGOP00000045291LRRcap domain-containing protein. (255 aa)
ENSGGOP00000045752RRM domain-containing protein. (470 aa)
PRPF4Pre-mRNA processing factor 4. (539 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (238 aa)
ENSGGOP00000048765Uncharacterized protein. (387 aa)
RBM7Uncharacterized protein. (146 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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