(18 nodes) Myosin V binding network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSGGOP00000031306	Uncharacterized protein. (92 aa)
	RAB3D	RAB3D, member RAS oncogene family. (219 aa)
	RAB6A	RAB6A, member RAS oncogene family. (208 aa)
	ENSGGOP00000034961	annotation not available (92 aa)
	RAB3B	RAB3B, member RAS oncogene family. (219 aa)
	RAB39B	RAB39B, member RAS oncogene family. (213 aa)
	RAB25	RAB25, member RAS oncogene family. (213 aa)
	RAB3C	RAB3C, member RAS oncogene family. (227 aa)
	RAB3A	RAB3A, member RAS oncogene family. (220 aa)
	RAB11A	RAB11A, member RAS oncogene family. (216 aa)
	RAB27A	RAB27A, member RAS oncogene family. (221 aa)
	RAB8A	RAB8A, member RAS oncogene family. (207 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	RAB10	RAB10, member RAS oncogene family. (200 aa)
	RAB14	RAB14, member RAS oncogene family. (215 aa)
	NPC1L1	NPC1 like intracellular cholesterol transporter 1. (1332 aa)
	RAB6B	RAB6B, member RAS oncogene family. (208 aa)
	RAB11B	Uncharacterized protein. (221 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000031306	RAB10	ENSGGOP00000031306	ENSGGOP00000019443	Uncharacterized protein.	RAB10, member RAS oncogene family.	0.522
ENSGGOP00000031306	RAB11B	ENSGGOP00000031306	ENSGGOP00000028164	Uncharacterized protein.	Uncharacterized protein.	0.644
ENSGGOP00000031306	RAB6A	ENSGGOP00000031306	ENSGGOP00000044194	Uncharacterized protein.	RAB6A, member RAS oncogene family.	0.602
ENSGGOP00000031306	RAB6B	ENSGGOP00000031306	ENSGGOP00000025650	Uncharacterized protein.	RAB6B, member RAS oncogene family.	0.412
ENSGGOP00000031306	RAB8A	ENSGGOP00000031306	ENSGGOP00000014865	Uncharacterized protein.	RAB8A, member RAS oncogene family.	0.671
ENSGGOP00000034961	RAB10	ENSGGOP00000034961	ENSGGOP00000019443	annotation not available	RAB10, member RAS oncogene family.	0.522
ENSGGOP00000034961	RAB11B	ENSGGOP00000034961	ENSGGOP00000028164	annotation not available	Uncharacterized protein.	0.644
ENSGGOP00000034961	RAB6A	ENSGGOP00000034961	ENSGGOP00000044194	annotation not available	RAB6A, member RAS oncogene family.	0.602
ENSGGOP00000034961	RAB6B	ENSGGOP00000034961	ENSGGOP00000025650	annotation not available	RAB6B, member RAS oncogene family.	0.412
ENSGGOP00000034961	RAB8A	ENSGGOP00000034961	ENSGGOP00000014865	annotation not available	RAB8A, member RAS oncogene family.	0.671
RAB10	ENSGGOP00000031306	ENSGGOP00000019443	ENSGGOP00000031306	RAB10, member RAS oncogene family.	Uncharacterized protein.	0.522
RAB10	ENSGGOP00000034961	ENSGGOP00000019443	ENSGGOP00000034961	RAB10, member RAS oncogene family.	annotation not available	0.522
RAB10	RAB11A	ENSGGOP00000019443	ENSGGOP00000013901	RAB10, member RAS oncogene family.	RAB11A, member RAS oncogene family.	0.590
RAB10	RAB11B	ENSGGOP00000019443	ENSGGOP00000028164	RAB10, member RAS oncogene family.	Uncharacterized protein.	0.502
RAB10	RAB14	ENSGGOP00000019443	ENSGGOP00000021747	RAB10, member RAS oncogene family.	RAB14, member RAS oncogene family.	0.624
RAB10	RAB6A	ENSGGOP00000019443	ENSGGOP00000044194	RAB10, member RAS oncogene family.	RAB6A, member RAS oncogene family.	0.565
RAB10	RAB6B	ENSGGOP00000019443	ENSGGOP00000025650	RAB10, member RAS oncogene family.	RAB6B, member RAS oncogene family.	0.442
RAB10	RAB8A	ENSGGOP00000019443	ENSGGOP00000014865	RAB10, member RAS oncogene family.	RAB8A, member RAS oncogene family.	0.598
RAB11A	RAB10	ENSGGOP00000013901	ENSGGOP00000019443	RAB11A, member RAS oncogene family.	RAB10, member RAS oncogene family.	0.590
RAB11A	RAB11B	ENSGGOP00000013901	ENSGGOP00000028164	RAB11A, member RAS oncogene family.	Uncharacterized protein.	0.971