(10 nodes) Histone pre-mRNA 3end processing complex network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LSM11	LSM11, U7 small nuclear RNA associated. (360 aa)
	SLBP	Stem-loop binding protein. (270 aa)
	YBX1	Y-box binding protein 1. (324 aa)
	ERI1	Exoribonuclease 1. (349 aa)
	G3RT71_GORGO	CSD_1 domain-containing protein. (318 aa)
	G3S2R7_GORGO	CSP domain-containing protein. (280 aa)
	G3S8E4_GORGO	CSP domain-containing protein. (314 aa)
	ENSGGOP00000038699	RRM domain-containing protein. (503 aa)
	SYNCRIP	Uncharacterized protein. (562 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein. (231 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000038699	ERI1	ENSGGOP00000038699	ENSGGOP00000012741	RRM domain-containing protein.	Exoribonuclease 1.	0.497
ENSGGOP00000038699	G3RT71_GORGO	ENSGGOP00000038699	ENSGGOP00000018996	RRM domain-containing protein.	CSD_1 domain-containing protein.	0.748
ENSGGOP00000038699	G3S2R7_GORGO	ENSGGOP00000038699	ENSGGOP00000022365	RRM domain-containing protein.	CSP domain-containing protein.	0.748
ENSGGOP00000038699	G3S8E4_GORGO	ENSGGOP00000038699	ENSGGOP00000024357	RRM domain-containing protein.	CSP domain-containing protein.	0.748
ENSGGOP00000038699	YBX1	ENSGGOP00000038699	ENSGGOP00000004660	RRM domain-containing protein.	Y-box binding protein 1.	0.748
ERI1	ENSGGOP00000038699	ENSGGOP00000012741	ENSGGOP00000038699	Exoribonuclease 1.	RRM domain-containing protein.	0.497
ERI1	SLBP	ENSGGOP00000012741	ENSGGOP00000003115	Exoribonuclease 1.	Stem-loop binding protein.	0.969
ERI1	SYNCRIP	ENSGGOP00000012741	ENSGGOP00000012587	Exoribonuclease 1.	Uncharacterized protein.	0.589
G3RT71_GORGO	ENSGGOP00000038699	ENSGGOP00000018996	ENSGGOP00000038699	CSD_1 domain-containing protein.	RRM domain-containing protein.	0.748
G3RT71_GORGO	G3S2R7_GORGO	ENSGGOP00000018996	ENSGGOP00000022365	CSD_1 domain-containing protein.	CSP domain-containing protein.	0.547
G3RT71_GORGO	G3S8E4_GORGO	ENSGGOP00000018996	ENSGGOP00000024357	CSD_1 domain-containing protein.	CSP domain-containing protein.	0.545
G3RT71_GORGO	SYNCRIP	ENSGGOP00000018996	ENSGGOP00000012587	CSD_1 domain-containing protein.	Uncharacterized protein.	0.833
G3RT71_GORGO	YBX1	ENSGGOP00000018996	ENSGGOP00000004660	CSD_1 domain-containing protein.	Y-box binding protein 1.	0.544
G3S2R7_GORGO	ENSGGOP00000038699	ENSGGOP00000022365	ENSGGOP00000038699	CSP domain-containing protein.	RRM domain-containing protein.	0.748
G3S2R7_GORGO	G3RT71_GORGO	ENSGGOP00000022365	ENSGGOP00000018996	CSP domain-containing protein.	CSD_1 domain-containing protein.	0.547
G3S2R7_GORGO	G3S8E4_GORGO	ENSGGOP00000022365	ENSGGOP00000024357	CSP domain-containing protein.	CSP domain-containing protein.	0.544
G3S2R7_GORGO	SYNCRIP	ENSGGOP00000022365	ENSGGOP00000012587	CSP domain-containing protein.	Uncharacterized protein.	0.748
G3S2R7_GORGO	YBX1	ENSGGOP00000022365	ENSGGOP00000004660	CSP domain-containing protein.	Y-box binding protein 1.	0.544
G3S8E4_GORGO	ENSGGOP00000038699	ENSGGOP00000024357	ENSGGOP00000038699	CSP domain-containing protein.	RRM domain-containing protein.	0.748
G3S8E4_GORGO	G3RT71_GORGO	ENSGGOP00000024357	ENSGGOP00000018996	CSP domain-containing protein.	CSD_1 domain-containing protein.	0.545