(17 nodes) RNA polymerase I complex network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3R6M6_GORGO	RNA polymerase II subunit E. (210 aa)
	POLR2L	RNA polymerase II subunit L. (67 aa)
	POLR1A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1720 aa)
	G3QK95_GORGO	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (125 aa)
	POLR2F	RNA polymerase II subunit F. (158 aa)
	ENSGGOP00000036704	Uncharacterized protein. (58 aa)
	ENSGGOP00000034792	Uncharacterized protein. (55 aa)
	POLR1D	RNA polymerase I and III subunit D. (133 aa)
	TWISTNB	TWIST neighbor. (338 aa)
	ZNRD1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
	POLR2K	RNA polymerase II subunit K. (58 aa)
	POLR1E	RNA polymerase I subunit E. (477 aa)
	CD3EAP	Uncharacterized protein. (510 aa)
	G3REH9_GORGO	DNA polymerase iota. (660 aa)
	POLR1B	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
	ENSGGOP00000050799	annotation not available (510 aa)
	POLR1C	RNA polymerase I and III subunit C. (350 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD3EAP	ENSGGOP00000034792	ENSGGOP00000015481	ENSGGOP00000034792	Uncharacterized protein.	Uncharacterized protein.	0.953
CD3EAP	ENSGGOP00000036704	ENSGGOP00000015481	ENSGGOP00000036704	Uncharacterized protein.	Uncharacterized protein.	0.964
CD3EAP	ENSGGOP00000050799	ENSGGOP00000015481	ENSGGOP00000050799	Uncharacterized protein.	annotation not available	0.543
CD3EAP	G3QK95_GORGO	ENSGGOP00000015481	ENSGGOP00000002866	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.978
CD3EAP	G3R6M6_GORGO	ENSGGOP00000015481	ENSGGOP00000010988	Uncharacterized protein.	RNA polymerase II subunit E.	0.984
CD3EAP	G3REH9_GORGO	ENSGGOP00000015481	ENSGGOP00000013966	Uncharacterized protein.	DNA polymerase iota.	0.452
CD3EAP	POLR1A	ENSGGOP00000015481	ENSGGOP00000001765	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.982
CD3EAP	POLR1B	ENSGGOP00000015481	ENSGGOP00000013164	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.983
CD3EAP	POLR1C	ENSGGOP00000015481	ENSGGOP00000039774	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.989
CD3EAP	POLR1D	ENSGGOP00000015481	ENSGGOP00000020295	Uncharacterized protein.	RNA polymerase I and III subunit D.	0.986
CD3EAP	POLR1E	ENSGGOP00000015481	ENSGGOP00000017061	Uncharacterized protein.	RNA polymerase I subunit E.	0.992
CD3EAP	POLR2F	ENSGGOP00000015481	ENSGGOP00000005108	Uncharacterized protein.	RNA polymerase II subunit F.	0.964
CD3EAP	POLR2K	ENSGGOP00000015481	ENSGGOP00000018982	Uncharacterized protein.	RNA polymerase II subunit K.	0.953
CD3EAP	POLR2L	ENSGGOP00000015481	ENSGGOP00000010549	Uncharacterized protein.	RNA polymerase II subunit L.	0.964
CD3EAP	TWISTNB	ENSGGOP00000015481	ENSGGOP00000019295	Uncharacterized protein.	TWIST neighbor.	0.991
CD3EAP	ZNRD1	ENSGGOP00000015481	ENSGGOP00000019052	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.987
ENSGGOP00000034792	CD3EAP	ENSGGOP00000034792	ENSGGOP00000015481	Uncharacterized protein.	Uncharacterized protein.	0.953
ENSGGOP00000034792	ENSGGOP00000036704	ENSGGOP00000034792	ENSGGOP00000036704	Uncharacterized protein.	Uncharacterized protein.	0.988
ENSGGOP00000034792	ENSGGOP00000050799	ENSGGOP00000034792	ENSGGOP00000050799	Uncharacterized protein.	annotation not available	0.953
ENSGGOP00000034792	G3QK95_GORGO	ENSGGOP00000034792	ENSGGOP00000002866	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.993