(23 nodes) Zinc finger, CCHC-type network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSGGOP00000036254	Uncharacterized protein. (178 aa)
	ZCRB1	Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
	LIN28B	Lin-28 homolog B. (258 aa)
	ZCCHC13	Zinc finger CCHC-type containing 13. (166 aa)
	ENSGGOP00000040146	CCHC-type domain-containing protein. (203 aa)
	LIN28A	Lin-28 homolog A. (209 aa)
	SREK1IP1	SREK1 interacting protein 1. (155 aa)
	RBM4B	RNA binding motif protein 4B. (359 aa)
	ZCCHC2	Zinc finger CCHC-type containing 2. (1095 aa)
	RBBP6	RB binding protein 6, ubiquitin ligase. (1792 aa)
	ZCCHC17	Zinc finger CCHC-type containing 17. (263 aa)
	ZCCHC9	Zinc finger CCHC-type containing 9. (271 aa)
	SRSF7	Serine and arginine rich splicing factor 7. (238 aa)
	G3RGL8_GORGO	Cleavage and polyadenylation specific factor 4. (269 aa)
	ZCCHC14	Zinc finger CCHC-type containing 14. (941 aa)
	TUT7	Terminal uridylyl transferase 7. (1494 aa)
	ZCCHC7	Zinc finger CCHC-type containing 7. (543 aa)
	PNMA3	PNMA family member 3. (455 aa)
	PEG10	Retrotransposon-derived protein PEG10 isoform 2. (783 aa)
	ENSGGOP00000029700	Uncharacterized protein. (315 aa)
	ENSGGOP00000032880	Zinc finger CCHC-type containing 3. (328 aa)
	ENSGGOP00000034390	CCHC-type domain-containing protein. (200 aa)
	ZCCHC24	Zinc finger CCHC-type containing 24. (241 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000034390	ZCRB1	ENSGGOP00000034390	ENSGGOP00000038056	CCHC-type domain-containing protein.	Zinc finger CCHC-type and RNA binding motif containing 1.	0.543
ENSGGOP00000040146	TUT7	ENSGGOP00000040146	ENSGGOP00000025218	CCHC-type domain-containing protein.	Terminal uridylyl transferase 7.	0.440
G3RGL8_GORGO	RBBP6	ENSGGOP00000014768	ENSGGOP00000006984	Cleavage and polyadenylation specific factor 4.	RB binding protein 6, ubiquitin ligase.	0.800
LIN28A	TUT7	ENSGGOP00000044505	ENSGGOP00000025218	Lin-28 homolog A.	Terminal uridylyl transferase 7.	0.809
LIN28B	TUT7	ENSGGOP00000040021	ENSGGOP00000025218	Lin-28 homolog B.	Terminal uridylyl transferase 7.	0.498
RBBP6	G3RGL8_GORGO	ENSGGOP00000006984	ENSGGOP00000014768	RB binding protein 6, ubiquitin ligase.	Cleavage and polyadenylation specific factor 4.	0.800
TUT7	ENSGGOP00000040146	ENSGGOP00000025218	ENSGGOP00000040146	Terminal uridylyl transferase 7.	CCHC-type domain-containing protein.	0.440
TUT7	LIN28A	ENSGGOP00000025218	ENSGGOP00000044505	Terminal uridylyl transferase 7.	Lin-28 homolog A.	0.809
TUT7	LIN28B	ENSGGOP00000025218	ENSGGOP00000040021	Terminal uridylyl transferase 7.	Lin-28 homolog B.	0.498
ZCRB1	ENSGGOP00000034390	ENSGGOP00000038056	ENSGGOP00000034390	Zinc finger CCHC-type and RNA binding motif containing 1.	CCHC-type domain-containing protein.	0.543